Tag Archives: AWS Glue

New Amazon CloudWatch log class to cost-effectively scale your AWS Glue workloads

Post Syndicated from Noritaka Sekiyama original https://aws.amazon.com/blogs/big-data/new-amazon-cloudwatch-log-class-to-cost-effectively-scale-your-aws-glue-workloads/

AWS Glue is a serverless data integration service that makes it easier to discover, prepare, and combine data for analytics, machine learning (ML), and application development. You can use AWS Glue to create, run, and monitor data integration and ETL (extract, transform, and load) pipelines and catalog your assets across multiple data stores.

One of the most common questions we get from customers is how to effectively optimize costs on AWS Glue. Over the years, we have built multiple features and tools to help customers manage their AWS Glue costs. For example, AWS Glue Auto Scaling and AWS Glue Flex can help you reduce the compute cost associated with processing your data. AWS Glue interactive sessions and notebooks can help you reduce the cost of developing your ETL jobs. For more information about cost-saving best practices, refer to Monitor and optimize cost on AWS Glue for Apache Spark. Additionally, to understand data transfer costs, refer to the Cost Optimization Pillar defined in AWS Well-Architected Framework. For data storage, you can apply general best practices defined for each data source. For a cost optimization strategy using Amazon Simple Storage Service (Amazon S3), refer to Optimizing storage costs using Amazon S3.

In this post, we tackle the remaining piece—the cost of logs written by AWS Glue.

Before we get into the cost analysis of logs, let’s understand the reasons to enable logging for your AWS Glue job and the current options available. When you start an AWS Glue job, it sends the real-time logging information to Amazon CloudWatch (every 5 seconds and before each executor stops) during the Spark application starts running. You can view the logs on the AWS Glue console or the CloudWatch console dashboard. These logs provide you with insights into your job runs and help you optimize and troubleshoot your AWS Glue jobs. AWS Glue offers a variety of filters and settings to reduce the verbosity of your logs. As the number of job runs increases, so does the volume of logs generated.

To optimize CloudWatch Logs costs, AWS recently announced a new log class for infrequently accessed logs called Amazon CloudWatch Logs Infrequent Access (Logs IA). This new log class offers a tailored set of capabilities at a lower cost for infrequently accessed logs, enabling you to consolidate all your logs in one place in a cost-effective manner. This class provides a more cost-effective option for ingesting logs that only need to be accessed occasionally for auditing or debugging purposes.

In this post, we explain what the Logs IA class is, how it can help reduce costs compared to the standard log class, and how to configure your AWS Glue resources to use this new log class. By routing logs to Logs IA, you can achieve significant savings in your CloudWatch Logs spend without sacrificing access to important debugging information when you need it.

CloudWatch log groups used by AWS Glue job continuous logging

When continuous logging is enabled, AWS Glue for Apache Spark writes Spark driver/executor logs and progress bar information into the following log group:

/aws-glue/jobs/logs-v2

If a security configuration is enabled for CloudWatch logs, AWS Glue for Apache Spark will create a log group named as follows for continuous logs:

<Log-Group-Name>-<Security-Configuration-Name>

The default and custom log groups will be as follows:

  • The default continuous log group will be /aws-glue/jobs/logs-v2-<Security-Configuration-Name>
  • The custom continuous log group will be <custom-log-group-name>-<Security-Configuration-Name>

You can provide a custom log group name through the job parameter –continuous-log-logGroup.

Getting started with the new Infrequent Access log class for AWS Glue workload

To gain the benefits from Logs IA for your AWS Glue workloads, you need to complete the following two steps:

  1. Create a new log group using the new Log IA class.
  2. Configure your AWS Glue job to point to the new log group

Complete the following steps to create a new log group using the new Infrequent Access log class:

  1. On the CloudWatch console, choose Log groups under Logs in the navigation pane.
  2. Choose Create log group.
  3. For Log group name, enter /aws-glue/jobs/logs-v2-infrequent-access.
  4. For Log class, choose Infrequent Access.
  5. Choose Create.

Complete the following steps to configure your AWS Glue job to point to the new log group:

  1. On the AWS Glue console, choose ETL jobs in the navigation pane.
  2. Choose your job.
  3. On the Job details tab, choose Add new parameter under Job parameters.
  4. For Key, enter --continuous-log-logGroup.
  5. For Value, enter /aws-glue/jobs/logs-v2-infrequent-access.
  6. Choose Save.
  7. Choose Run to trigger the job.

New log events are written into the new log group.

View the logs with the Infrequent Access log class

Now you’re ready to view the logs with the Infrequent Access log class. Open the log group /aws-glue/jobs/logs-v2-infrequent-access on the CloudWatch console.

When you choose one of the log streams, you will notice that it redirects you to the CloudWatch console Logs Insight page with a pre-configured default command and your log stream selected by default. By choosing Run query, you can view the actual log events on the Logs Insights page.

Considerations

Keep in mind the following considerations:

  • You cannot change the log class of a log group after it’s created. You need to create a new log group to configure the Infrequent Access class.
  • The Logs IA class offers a subset of CloudWatch Logs capabilities, including managed ingestion, storage, cross-account log analytics, and encryption with a lower ingestion price per GB. For example, you can’t view log events through the standard CloudWatch Logs console. To learn more about the features offered across both log classes, refer to Log Classes.

Conclusion

This post provided step-by-step instructions to guide you through enabling Logs IA for your AWS Glue job logs. If your AWS Glue ETL jobs generate large volumes of log data that makes it a challenge as you scale your applications, the best practices demonstrated in this post can help you cost-effectively scale while centralizing all your logs in CloudWatch Logs. Start using the Infrequent Access class with your AWS Glue workloads today and enjoy the cost benefits.


About the Authors

Noritaka Sekiyama is a Principal Big Data Architect on the AWS Glue team. He works based in Tokyo, Japan. He is responsible for building software artifacts to help customers. In his spare time, he enjoys cycling on his road bike.

Abeetha Bala is a Senior Product Manager for Amazon CloudWatch, primarily focused on logs. Being customer obsessed, she solves observability challenges through innovative and cost-effective ways.

Kinshuk Pahare is a leader in AWS Glue’s product management team. He drives efforts on the platform, developer experience, and big data processing frameworks like Apache Spark, Ray, and Python Shell.

Build efficient ETL pipelines with AWS Step Functions distributed map and redrive feature

Post Syndicated from Sriharsh Adari original https://aws.amazon.com/blogs/big-data/build-efficient-etl-pipelines-with-aws-step-functions-distributed-map-and-redrive-feature/

AWS Step Functions is a fully managed visual workflow service that enables you to build complex data processing pipelines involving a diverse set of extract, transform, and load (ETL) technologies such as AWS Glue, Amazon EMR, and Amazon Redshift. You can visually build the workflow by wiring individual data pipeline tasks and configuring payloads, retries, and error handling with minimal code.

While Step Functions supports automatic retries and error handling when data pipeline tasks fail due to momentary or transient errors, there can be permanent failures such as incorrect permissions, invalid data, and business logic failure during the pipeline run. This requires you to identify the issue in the step, fix the issue and restart the workflow. Previously, to rerun the failed step, you needed to restart the entire workflow from the very beginning. This leads to delays in completing the workflow, especially if it’s a complex, long-running ETL pipeline. If the pipeline has many steps using map and parallel states, this also leads to increased cost due to increases in the state transition for running the pipeline from the beginning.

Step Functions now supports the ability for you to redrive your workflow from a failed, aborted, or timed-out state so you can complete workflows faster and at a lower cost, and spend more time delivering business value. Now you can recover from unhandled failures faster by redriving failed workflow runs, after downstream issues are resolved, using the same input provided to the failed state.

In this post, we show you an ETL pipeline job that exports data from Amazon Relational Database Service (Amazon RDS) tables using the Step Functions distributed map state. Then we simulate a failure and demonstrate how to use the new redrive feature to restart the failed task from the point of failure.

Solution overview

One of the common functionalities involved in data pipelines is extracting data from multiple data sources and exporting it to a data lake or synchronizing the data to another database. You can use the Step Functions distributed map state to run hundreds of such export or synchronization jobs in parallel. Distributed map can read millions of objects from Amazon Simple Storage Service (Amazon S3) or millions of records from a single S3 object, and distribute the records to downstream steps. Step Functions runs the steps within the distributed map as child workflows at a maximum parallelism of 10,000. A concurrency of 10,000 is well above the concurrency supported by many other AWS services such as AWS Glue, which has a soft limit of 1,000 job runs per job.

The sample data pipeline sources product catalog data from Amazon DynamoDB and customer order data from Amazon RDS for PostgreSQL database. The data is then cleansed, transformed, and uploaded to Amazon S3 for further processing. The data pipeline starts with an AWS Glue crawler to create the Data Catalog for the RDS database. Because starting an AWS Glue crawler is asynchronous, the pipeline has a wait loop to check if the crawler is complete. After the AWS Glue crawler is complete, the pipeline extracts data from the DynamoDB table and RDS tables. Because these two steps are independent, they are run as parallel steps: one using an AWS Lambda function to export, transform, and load the data from DynamoDB to an S3 bucket, and the other using a distributed map with AWS Glue job sync integration to do the same from the RDS tables to an S3 bucket. Note that AWS Identity and Access Management (IAM) permissions are required for invoking an AWS Glue job from Step Functions. For more information, refer to IAM Policies for invoking AWS Glue job from Step Functions.

The following diagram illustrates the Step Functions workflow.

There are multiple tables related to customers and order data in the RDS database. Amazon S3 hosts the metadata of all the tables as a .csv file. The pipeline uses the Step Functions distributed map to read the table metadata from Amazon S3, iterate on every single item, and call the downstream AWS Glue job in parallel to export the data. See the following code:

"States": {
            "Map": {
              "Type": "Map",
              "ItemProcessor": {
                "ProcessorConfig": {
                  "Mode": "DISTRIBUTED",
                  "ExecutionType": "STANDARD"
                },
                "StartAt": "Export data for a table",
                "States": {
                  "Export data for a table": {
                    "Type": "Task",
                    "Resource": "arn:aws:states:::glue:startJobRun.sync",
                    "Parameters": {
                      "JobName": "ExportTableData",
                      "Arguments": {
                        "--dbtable.$": "$.tables"
                      }
                    },
                    "End": true
                  }
                }
              },
              "Label": "Map",
              "ItemReader": {
                "Resource": "arn:aws:states:::s3:getObject",
                "ReaderConfig": {
                  "InputType": "CSV",
                  "CSVHeaderLocation": "FIRST_ROW"
                },
                "Parameters": {
                  "Bucket": "123456789012-stepfunction-redrive",
                  "Key": "tables.csv"
                }
              },
              "ResultPath": null,
              "End": true
            }
          }

Prerequisites

To deploy the solution, you need the following prerequisites:

Launch the CloudFormation template

Complete the following steps to deploy the solution resources using AWS CloudFormation:

  1. Choose Launch Stack to launch the CloudFormation stack:
  2. Enter a stack name.
  3. Select all the check boxes under Capabilities and transforms.
  4. Choose Create stack.

The CloudFormation template creates many resources, including the following:

  • The data pipeline described earlier as a Step Functions workflow
  • An S3 bucket to store the exported data and the metadata of the tables in Amazon RDS
  • A product catalog table in DynamoDB
  • An RDS for PostgreSQL database instance with pre-loaded tables
  • An AWS Glue crawler that crawls the RDS table and creates an AWS Glue Data Catalog
  • A parameterized AWS Glue job to export data from the RDS table to an S3 bucket
  • A Lambda function to export data from DynamoDB to an S3 bucket

Simulate the failure

Complete the following steps to test the solution:

  1. On the Step Functions console, choose State machines in the navigation pane.
  2. Choose the workflow named ETL_Process.
  3. Run the workflow with default input.

Within a few seconds, the workflow fails at the distributed map state.

You can inspect the map run errors by accessing the Step Functions workflow execution events for map runs and child workflows. In this example, you can identity the exception is due to Glue.ConcurrentRunsExceededException from AWS Glue. The error indicates there are more concurrent requests to run an AWS Glue job than are configured. Distributed map reads the table metadata from Amazon S3 and invokes as many AWS Glue jobs as the number of rows in the .csv file, but AWS Glue job is set with the concurrency of 3 when it is created. This resulted in the child workflow failure, cascading the failure to the distributed map state and then the parallel state. The other step in the parallel state to fetch the DynamoDB table ran successfully. If any step in the parallel state fails, the whole state fails, as seen with the cascading failure.

Handle failures with distributed map

By default, when a state reports an error, Step Functions causes the workflow to fail. There are multiple ways you can handle this failure with distributed map state:

  • Step Functions enables you to catch errors, retry errors, and fail back to another state to handle errors gracefully. See the following code:
    Retry": [
                          {
                            "ErrorEquals": [
                              "Glue.ConcurrentRunsExceededException "
                            ],
                            "BackoffRate": 20,
                            "IntervalSeconds": 10,
                            "MaxAttempts": 3,
                            "Comment": "Exception",
                            "JitterStrategy": "FULL"
                          }
                        ]
    

  • Sometimes, businesses can tolerate failures. This is especially true when you are processing millions of items and you expect data quality issues in the dataset. By default, when an iteration of map state fails, all other iterations are aborted. With distributed map, you can specify the maximum number of, or percentage of, failed items as a failure threshold. If the failure is within the tolerable level, the distributed map doesn’t fail.
  • The distributed map state allows you to control the concurrency of the child workflows. You can set the concurrency to map it to the AWS Glue job concurrency. Remember, this concurrency is applicable only at the workflow execution level—not across workflow executions.
  • You can redrive the failed state from the point of failure after fixing the root cause of the error.

Redrive the failed state

The root cause of the issue in the sample solution is the AWS Glue job concurrency. To address this by redriving the failed state, complete the following steps:

  1. On the AWS Glue console, navigate to the job named ExportsTableData.
  2. On the Job details tab, under Advanced properties, update Maximum concurrency to 5.

With the launch of redrive feature, You can use redrive to restart executions of standard workflows that didn’t complete successfully in the last 14 days. These include failed, aborted, or timed-out runs. You can only redrive a failed workflow from the step where it failed using the same input as the last non-successful state. You can’t redrive a failed workflow using a state machine definition that is different from the initial workflow execution. After the failed state is redriven successfully, Step Functions runs all the downstream tasks automatically. To learn more about how distributed map redrive works, refer to Redriving Map Runs.

Because the distributed map runs the steps inside the map as child workflows, the workflow IAM execution role needs permission to redrive the map run to restart the distributed map state:

{
  "Version": "2012-10-17",
  "Statement": [
    {
      "Effect": "Allow",
      "Action": [
        "states:RedriveExecution"
      ],
      "Resource": "arn:aws:states:us-east-2:123456789012:execution:myStateMachine/myMapRunLabel:*"
    }
  ]
}

You can redrive a workflow from its failed step programmatically, via the AWS Command Line Interface (AWS CLI) or AWS SDK, or using the Step Functions console, which provides a visual operator experience.

  1. On the Step Functions console, navigate to the failed workflow you want to redrive.
  2. On the Details tab, choose Redrive from failure.

The pipeline now runs successfully because there is enough concurrency to run the AWS Glue jobs.

To redrive a workflow programmatically from its point of failure, call the new Redrive Execution API action. The same workflow starts from the last non-successful state and uses the same input as the last non-successful state from the initial failed workflow. The state to redrive from the workflow definition and the previous input are immutable.

Note the following regarding different types of child workflows:

  • Redrive for express child workflows – For failed child workflows that are express workflows within a distributed map, the redrive capability ensures a seamless restart from the beginning of the child workflow. This allows you to resolve issues that are specific to individual iterations without restarting the entire map.
  • Redrive for standard child workflows – For failed child workflows within a distributed map that are standard workflows, the redrive feature functions the same way as with standalone standard workflows. You can restart the failed state within each map iteration from its point of failure, skipping unnecessary steps that have already successfully run.

You can use Step Functions status change notifications with Amazon EventBridge for failure notifications such as sending an email on failure.

Clean up

To clean up your resources, delete the CloudFormation stack via the AWS CloudFormation console.

Conclusion

In this post, we showed you how to use the Step Functions redrive feature to redrive a failed step within a distributed map by restarting the failed step from the point of failure. The distributed map state allows you to write workflows that coordinate large-scale parallel workloads within your serverless applications. Step Functions runs the steps within the distributed map as child workflows at a maximum parallelism of 10,000, which is well above the concurrency supported by many AWS services.

To learn more about distributed map, refer to Step Functions – Distributed Map. To learn more about redriving workflows, refer to Redriving executions.


About the Authors

Sriharsh Adari is a Senior Solutions Architect at Amazon Web Services (AWS), where he helps customers work backwards from business outcomes to develop innovative solutions on AWS. Over the years, he has helped multiple customers on data platform transformations across industry verticals. His core area of expertise include Technology Strategy, Data Analytics, and Data Science. In his spare time, he enjoys playing Tennis.

Joe Morotti is a Senior Solutions Architect at Amazon Web Services (AWS), working with Enterprise customers across the Midwest US to develop innovative solutions on AWS. He has held a wide range of technical roles and enjoys showing customers the art of the possible. He has attained seven AWS certification and has a passion for AI/ML and the contact center space. In his free time, he enjoys spending quality time with his family exploring new places and overanalyzing his sports team’s performance.

Uma Ramadoss is a specialist Solutions Architect at Amazon Web Services, focused on the Serverless platform. She is responsible for helping customers design and operate event-driven cloud-native applications and modern business workflows using services like Lambda, EventBridge, Step Functions, and Amazon MWAA.

Automatically detect Personally Identifiable Information in Amazon Redshift using AWS Glue

Post Syndicated from Manikanta Gona original https://aws.amazon.com/blogs/big-data/automatically-detect-personally-identifiable-information-in-amazon-redshift-using-aws-glue/

With the exponential growth of data, companies are handling huge volumes and a wide variety of data including personally identifiable information (PII). PII is a legal term pertaining to information that can identify, contact, or locate a single person. Identifying and protecting sensitive data at scale has become increasingly complex, expensive, and time-consuming. Organizations have to adhere to data privacy, compliance, and regulatory requirements such as GDPR and CCPA, and it’s important to identify and protect PII to maintain compliance. You need to identify sensitive data, including PII such as name, Social Security Number (SSN), address, email, driver’s license, and more. Even after identification, it’s cumbersome to implement redaction, masking, or encryption of sensitive data at scale.

Many companies identify and label PII through manual, time-consuming, and error-prone reviews of their databases, data warehouses and data lakes, thereby rendering their sensitive data unprotected and vulnerable to regulatory penalties and breach incidents.

In this post, we provide an automated solution to detect PII data in Amazon Redshift using AWS Glue.

Solution overview

With this solution, we detect PII in data on our Redshift data warehouse so that the we take and protect the data. We use the following services:

  • Amazon Redshift is a cloud data warehousing service that uses SQL to analyze structured and semi-structured data across data warehouses, operational databases, and data lakes, using AWS-designed hardware and machine learning (ML) to deliver the best price/performance at any scale. For our solution, we use Amazon Redshift to store the data.
  • AWS Glue is a serverless data integration service that makes it straightforward to discover, prepare, and combine data for analytics, ML, and application development. We use AWS Glue to discover the PII data that is stored in Amazon Redshift.
  • Amazon Simple Storage Services (Amazon S3) is a storage service offering industry-leading scalability, data availability, security, and performance.

The following diagram illustrates our solution architecture.

The solution includes the following high-level steps:

  1. Set up the infrastructure using an AWS CloudFormation template.
  2. Load data from Amazon S3 to the Redshift data warehouse.
  3. Run an AWS Glue crawler to populate the AWS Glue Data Catalog with tables.
  4. Run an AWS Glue job to detect the PII data.
  5. Analyze the output using Amazon CloudWatch.

Prerequisites

The resources created in this post assume that a VPC is in place along with a private subnet and both their identifiers. This ensures that we don’t substantially change the VPC and subnet configuration. Therefore, we want to set up our VPC endpoints based on the VPC and subnet we choose to expose it in.

Before you get started, create the following resources as prerequisites:

  • An existing VPC
  • A private subnet in that VPC
  • A VPC gateway S3 endpoint
  • A VPC STS gateway endpoint

Set up the infrastructure with AWS CloudFormation

To create your infrastructure with a CloudFormation template, complete the following steps:

  1. Open the AWS CloudFormation console in your AWS account.
  2. Choose Launch Stack:
  3. Choose Next.
  4. Provide the following information:
    1. Stack name
    2. Amazon Redshift user name
    3. Amazon Redshift password
    4. VPC ID
    5. Subnet ID
    6. Availability Zones for the subnet ID
  5. Choose Next.
  6. On the next page, choose Next.
  7. Review the details and select I acknowledge that AWS CloudFormation might create IAM resources.
  8. Choose Create stack.
  9. Note the values for S3BucketName and RedshiftRoleArn on the stack’s Outputs tab.

Load data from Amazon S3 to the Redshift Data warehouse

With the COPY command, we can load data from files located in one or more S3 buckets. We use the FROM clause to indicate how the COPY command locates the files in Amazon S3. You can provide the object path to the data files as part of the FROM clause, or you can provide the location of a manifest file that contains a list of S3 object paths. COPY from Amazon S3 uses an HTTPS connection.

For this post, we use a sample personal health dataset. Load the data with the following steps:

  1. On the Amazon S3 console, navigate to the S3 bucket created from the CloudFormation template and check the dataset.
  2. Connect to the Redshift data warehouse using the Query Editor v2 by establishing a connection with the database you creating using the CloudFormation stack along with the user name and password.

After you’re connected, you can use the following commands to create the table in the Redshift data warehouse and copy the data.

  1. Create a table with the following query:
    CREATE TABLE personal_health_identifiable_information (
        mpi char (10),
        firstName VARCHAR (30),
        lastName VARCHAR (30),
        email VARCHAR (75),
        gender CHAR (10),
        mobileNumber VARCHAR(20),
        clinicId VARCHAR(10),
        creditCardNumber VARCHAR(50),
        driverLicenseNumber VARCHAR(40),
        patientJobTitle VARCHAR(100),
        ssn VARCHAR(15),
        geo VARCHAR(250),
        mbi VARCHAR(50)    
    );

  2. Load the data from the S3 bucket:
    COPY personal_health_identifiable_information
    FROM 's3://<S3BucketName>/personal_health_identifiable_information.csv'
    IAM_ROLE '<RedshiftRoleArn>'
    CSV
    delimiter ','
    region '<aws region>'
    IGNOREHEADER 1;

Provide values for the following placeholders:

  • RedshiftRoleArn – Locate the ARN on the CloudFormation stack’s Outputs tab
  • S3BucketName – Replace with the bucket name from the CloudFormation stack
  • aws region – Change to the Region where you deployed the CloudFormation template
  1. To verify the data was loaded, run the following command:
    SELECT * FROM personal_health_identifiable_information LIMIT 10;

Run an AWS Glue crawler to populate the Data Catalog with tables

On the AWS Glue console, select the crawler that you deployed as part of the CloudFormation stack with the name crawler_pii_db, then choose Run crawler.

When the crawler is complete, the tables in the database with the name pii_db are populated in the AWS Glue Data Catalog, and the table schema looks like the following screenshot.

Run an AWS Glue job to detect PII data and mask the corresponding columns in Amazon Redshift

On the AWS Glue console, choose ETL Jobs in the navigation pane and locate the detect-pii-data job to understand its configuration. The basic and advanced properties are configured using the CloudFormation template.

The basic properties are as follows:

  • Type – Spark
  • Glue version – Glue 4.0
  • Language – Python

For demonstration purposes, the job bookmarks option is disabled, along with the auto scaling feature.

We also configure advanced properties regarding connections and job parameters.
To access data residing in Amazon Redshift, we created an AWS Glue connection that utilizes the JDBC connection.

We also provide custom parameters as key-value pairs. For this post, we sectionalize the PII into five different detection categories:

  • universal – PERSON_NAME, EMAIL, CREDIT_CARD
  • hipaa – PERSON_NAME, PHONE_NUMBER, USA_SSN, USA_ITIN, BANK_ACCOUNT, USA_DRIVING_LICENSE, USA_HCPCS_CODE, USA_NATIONAL_DRUG_CODE, USA_NATIONAL_PROVIDER_IDENTIFIER, USA_DEA_NUMBER, USA_HEALTH_INSURANCE_CLAIM_NUMBER, USA_MEDICARE_BENEFICIARY_IDENTIFIER
  • networking – IP_ADDRESS, MAC_ADDRESS
  • united_states – PHONE_NUMBER, USA_PASSPORT_NUMBER, USA_SSN, USA_ITIN, BANK_ACCOUNT
  • custom – Coordinates

If you’re trying this solution from other countries, you can specify the custom PII fields using the custom category, because this solution is created based on US regions.

For demonstration purposes, we use a single table and pass it as the following parameter:

--table_name: table_name

For this post, we name the table personal_health_identifiable_information.

You can customize these parameters based on the individual business use case.

Run the job and wait for the Success status.

The job has two goals. The first goal is to identify PII data-related columns in the Redshift table and produce a list of these column names. The second goal is the obfuscation of data in those specific columns of the target table. As a part of the second goal, it reads the table data, applies a user-defined masking function to those specific columns, and updates the data in the target table using a Redshift staging table (stage_personal_health_identifiable_information) for the upserts.

Alternatively, you can also use dynamic data masking (DDM) in Amazon Redshift to protect sensitive data in your data warehouse.

Analyze the output using CloudWatch

When the job is complete, let’s review the CloudWatch logs to understand how the AWS Glue job ran. We can navigate to the CloudWatch logs by choosing Output logs on the job details page on the AWS Glue console.

The job identified every column that contains PII data, including custom fields passed using the AWS Glue job sensitive data detection fields.

Clean up

To clean up the infrastructure and avoid additional charges, complete the following steps:

  1. Empty the S3 buckets.
  2. Delete the endpoints you created.
  3. Delete the CloudFormation stack via the AWS CloudFormation console to delete the remaining resources.

Conclusion

With this solution, you can automatically scan the data located in Redshift clusters using an AWS Glue job, identify PII, and take necessary actions. This could help your organization with security, compliance, governance, and data protection features, which contribute towards the data security and data governance.


About the Authors

Manikanta Gona is a Data and ML Engineer at AWS Professional Services. He joined AWS in 2021 with 6+ years of experience in IT. At AWS, he is focused on Data Lake implementations, and Search, Analytical workloads using Amazon OpenSearch Service. In his spare time, he love to garden, and go on hikes and biking with his husband.

Denys Novikov is a Senior Data Lake Architect with the Professional Services team at Amazon Web Services. He is specialized in the design and implementation of Analytics, Data Management and Big Data systems for Enterprise customers.

Anjan Mukherjee is a Data Lake Architect at AWS, specializing in big data and analytics solutions. He helps customers build scalable, reliable, secure and high-performance applications on the AWS platform.

Modernize your ETL platform with AWS Glue Studio: A case study from BMS

Post Syndicated from Sivaprasad Mahamkali original https://aws.amazon.com/blogs/big-data/modernize-your-etl-platform-with-aws-glue-studio-a-case-study-from-bms/

This post is co-written with Ramesh Daddala, Jitendra Kumar Dash and Pavan Kumar Bijja from Bristol Myers Squibb.

Bristol Myers Squibb (BMS) is a global biopharmaceutical company whose mission is to discover, develop, and deliver innovative medicines that help patients prevail over serious diseases. BMS is consistently innovating, achieving significant clinical and regulatory successes. In collaboration with AWS, BMS identified a business need to migrate and modernize their custom extract, transform, and load (ETL) platform to a native AWS solution to reduce complexities, resources, and investment to upgrade when new Spark, Python, or AWS Glue versions are released. In addition to using native managed AWS services that BMS didn’t need to worry about upgrading, BMS was looking to offer an ETL service to non-technical business users that could visually compose data transformation workflows and seamlessly run them on the AWS Glue Apache Spark-based serverless data integration engine. AWS Glue Studio is a graphical interface that makes it easy to create, run, and monitor ETL jobs in AWS Glue. Offering this service reduced BMS’s operational maintenance and cost, and offered flexibility to business users to perform ETL jobs with ease.

For the past 5 years, BMS has used a custom framework called Enterprise Data Lake Services (EDLS) to create ETL jobs for business users. Although this framework met their ETL objectives, it was difficult to maintain and upgrade. BMS’s EDLS platform hosts over 5,000 jobs and is growing at 15% YoY (year over year). Each time the newer version of Apache Spark (and corresponding AWS Glue version) was released, it required significant operational support and time-consuming manual changes to upgrade existing ETL jobs. Manually upgrading, testing, and deploying over 5,000 jobs every few quarters was time consuming, error prone, costly, and not sustainable. Because another release for the EDLS framework was pending, BMS decided to assess alternate managed solutions to reduce their operational and upgrade challenges.

In this post, we share how BMS will modernize leveraging the success of the proof of concept targeting BMS’s ETL platform using AWS Glue Studio.

Solution overview

This solution addresses BMS’s EDLS requirements to overcome challenges using a custom-built ETL framework that required frequent maintenance and component upgrades (requiring extensive testing cycles), avoid complexity, and reduce the overall cost of the underlying infrastructure derived from the proof of concept. BMS had the following goals:

  • Develop ETL jobs using visual workflows provided by the AWS Glue Studio visual editor. The AWS Glue Studio visual editor is a low-code environment that allows you to compose data transformation workflows, seamlessly run them on the AWS Glue Apache Spark-based serverless data integration engine, and inspect the schema and data results in each step of the job.
  • Migrate over 5,000 existing ETL jobs using native AWS Glue Studio in an automated and scalable manner.

EDLS job steps and metadata

Every EDLS job comprises one or more job steps chained together and run in a predefined order orchestrated by the custom ETL framework. Each job step incorporates the following ETL functions:

  • File ingest – File ingestion enables you to ingest or list files from multiple file sources, like Amazon Simple Storage Service (Amazon S3), SFTP, and more. The metadata holds configurations for the file ingestion step to connect to Amazon S3 or SFTP endpoints and ingest files to target location. It retrieves the specified files and available metadata to show on the UI.
  • Data quality check – The data quality module enables you to perform quality checks on a huge amount of data and generate reports that describe and validate the data quality. The data quality step uses an EDLS ingested source object from Amazon S3 and runs one to many data conformance checks that are configured by the tenant.
  • Data transform join – This is one of the submodules of the data transform module that can perform joins between the datasets using a custom SQL based on the metadata configuration.
  • Database ingest – The database ingestion step is one of the important service components in EDLS, which facilitates you to obtain and import the desired data from the database and export it to a specific file in the location of your choice.
  • Data transform – The data transform module performs various data transformations against the source data using JSON-driven rules. Each data transform capability has its own JSON rule and, based on the specific JSON rule you provide, EDLS performs the data transformation on the files available in the Amazon S3 location.
  • Data persistence – The data persistence module is one of the important service components in EDLS, which enables you to obtain the desired data from the source and persist it to an Amazon Relational Database Service (Amazon RDS) database.

The metadata corresponding to each job step includes ingest sources, transformation rules, data quality checks, and data destinations stored in an RDS instance.

Migration utility

The solution involves building a Python utility that reads EDLS metadata from the RDS database and translating each of the job steps into an equivalent AWS Glue Studio visual editor JSON node representation.

AWS Glue Studio provides two types of transforms:

  • AWS Glue-native transforms – These are available to all users and are managed by AWS Glue.
  • Custom visual transforms – This new functionality allows you to upload custom-built transforms used in AWS Glue Studio. Custom visual transforms expand the managed transforms, enabling you to search and use transforms from the AWS Glue Studio interface.

The following is a high-level diagram depicting the sequence flow of migrating a BMS EDLS job to an AWS Glue Studio visual editor job.

Migrating BMS EDLS jobs to AWS Glue Studio includes the following steps:

  1. The Python utility reads existing metadata from the EDLS metadata database.
  2. For each job step type, based on the job metadata, the Python utility selects either the native AWS Glue transform, if available, or a custom-built visual transform (when the native functionality is missing).
  3. The Python utility parses the dependency information from metadata and builds a JSON object representing a visual workflow represented as a Directed Acyclic Graph (DAG).
  4. The JSON object is sent to the AWS Glue API, creating the AWS Glue ETL job. These jobs are visually represented in the AWS Glue Studio visual editor using a series of sources, transforms (native and custom), and targets.

Sample ETL job generation using AWS Glue Studio

The following flow diagram depicts a sample ETL job that incrementally ingests the source RDBMS data in AWS Glue based on modified timestamps using a custom SQL and merges it into the target data on Amazon S3.

The preceding ETL flow can be represented using the AWS Glue Studio visual editor through a combination of native and custom visual transforms.

Custom visual transform for incremental ingestion

Post POC, BMS and AWS identified there will be a need to leverage custom transforms to execute a subset of jobs leveraging their current EDLS Service where Glue Studio functionality will not be a natural fit. The BMS team’s requirement was to ingest data from various databases without depending on the existence of transaction logs or specific schema, so AWS Database Migration Service (AWS DMS) wasn’t an option for them. AWS Glue Studio provides the native SQL query visual transform, where a custom SQL query can be used to transform the source data. However, in order to query the source database table based on a modified timestamp column to retrieve new and modified records since the last ETL run, the previous timestamp column state needs to be persisted so it can be used in the current ETL run. This needs to be a recurring process and can also be abstracted across various RDBMS sources, including Oracle, MySQL, Microsoft SQL Server, SAP Hana, and more.

AWS Glue provides a job bookmark feature to track the data that has already been processed during a previous ETL run. An AWS Glue job bookmark supports one or more columns as the bookmark keys to determine new and processed data, and it requires that the keys are sequentially increasing or decreasing without gaps. Although this works for many incremental load use cases, the requirement is to ingest data from different sources without depending on any specific schema, so we didn’t use an AWS Glue job bookmark in this use case.

The SQL-based incremental ingestion pull can be developed in a generic way using a custom visual transform using a sample incremental ingestion job from a MySQL database. The incremental data is merged into the target Amazon S3 location in Apache Hudi format using an upsert write operation.

In the following example, we’re using the MySQL data source node to define the connection but the DynamicFrame of the data source itself is not used. The custom transform node (DB incremental ingestion) will act as the source for reading the data incrementally using the custom SQL query and the previously persisted timestamp from the last ingestion.

The transform accepts as input parameters the preconfigured AWS Glue connection name, database type, table name, and custom SQL (parameterized timestamp field).

The following is the sample visual transform Python code:

import boto3
from awsglue import DynamicFrame
from datetime import datetime

region_name = "us-east-1"

dyna_client = boto3.client('dynamodb')
HISTORIC_DATE = datetime(1970,1,1).strftime("%Y-%m-%d %H:%M:%S")
DYNAMODB_TABLE = "edls_run_stats"

def db_incremental(self, transformation_node, con_name, con_type, table_name, sql_query):
    logger = self.glue_ctx.get_logger()

    last_updt_tmst = get_table_last_updt_tmst(logger, DYNAMODB_TABLE, transformation_node)

    logger.info(f"Last updated timestamp from the DynamoDB-> {last_updt_tmst}")

    sql_query = sql_query.format(**{"lastmdfdtmst": last_updt_tmst})

    connection_options_source = {
        "useConnectionProperties": "true",
        "connectionName": con_name,
        "dbtable": table_name,
        "sampleQuery": sql_query
    }

    df = self.glue_ctx.create_dynamic_frame.from_options(connection_type= con_type, connection_options= connection_options_source )
                                         
    return df

DynamicFrame.db_incremental = db_incremental

def get_table_last_updt_tmst(logger, table_name, transformation_node):
    response = dyna_client.get_item(TableName=table_name,
                                    Key={'transformation_node': {'S': transformation_node}}
                                    )
    if 'Item' in response and 'last_updt_tmst' in response['Item']:
        return response['Item']['last_updt_tmst']['S']
    else:
        return HISTORIC_DATE

To merge the source data into the Amazon S3 target, a data lake framework like Apache Hudi or Apache Iceberg can be used, which is natively supported in AWS Glue 3.0 and later.

You can also use Amazon EventBridge to detect the final AWS Glue job state change and update the Amazon DynamoDB table’s last ingested timestamp accordingly.

Build the AWS Glue Studio job using the AWS SDK for Python (Boto3) and AWS Glue API

For the sample ETL flow and the corresponding AWS Glue Studio ETL job we showed earlier, the underlying CodeGenConfigurationNode struct (an AWS Glue job definition pulled using the AWS Command Line Interface (AWS CLI) command aws glue get-job –job-name <jobname>) is represented as a JSON object, shown in the following code:

"CodeGenConfigurationNodes": {<br />"node-1679802581077": {<br />"DynamicTransform": {<br />"Name": "DB Incremental Ingestion",<br />"TransformName": "db_incremental",<br />"Inputs": [<br />"node-1679707801419"<br />],<br />"Parameters": [<br />{<br />"Name": "node_name",<br />"Type": "str",<br />"Value": [<br />"job_123_incr_ingst_table1"<br />],<br />"IsOptional": false<br />},<br />{<br />"Name": "jdbc_url",<br />"Type": "str",<br />"Value": [<br />"jdbc:mysql://database.xxxx.us-west-2.rds.amazonaws.com:3306/db_schema"<br />],<br />"IsOptional": false<br />},<br />{<br />"Name": "db_creds",<br />"Type": "str",<br />"Value": [<br />"creds"<br />],<br />"IsOptional": false<br />},<br />{<br />"Name": "table_name",<br />"Type": "str",<br />"Value": [<br />"tables"<br />],<br />"IsOptional": false<br />}<br />]<br />}<br />}<br />}<br />}

The JSON object (ETL job DAG) represented in the CodeGenConfigurationNode is generated through a series of native and custom transforms with the respective input parameter arrays. This can be accomplished using Python JSON encoders that serialize the class objects to JSON and subsequently create the AWS Glue Studio visual editor job using the Boto3 library and AWS Glue API.

Inputs required to configure the AWS Glue transforms are sourced from the EDLS jobs metadata database. The Python utility reads the metadata information, parses it, and configures the nodes automatically.

The order and sequencing of the nodes is sourced from the EDLS jobs metadata, with one node becoming the input to one or more downstream nodes building the DAG flow.

Benefits of the solution

The migration path will help BMS achieve their core objectives of decomposing their existing custom ETL framework to modular, visually configurable, less complex, and easily manageable pipelines using visual ETL components. The utility aids the migration of the legacy ETL pipelines to native AWS Glue Studio jobs in an automated and scalable manner.

With consistent out-of-the box visual ETL transforms in the AWS Glue Studio interface, BMS will be able to build sophisticated data pipelines without having to write code.

The custom visual transforms will extend AWS Glue Studio capabilities and fulfill some of the BMS ETL requirements where the native transforms are missing that functionality. Custom transforms will help define, reuse, and share business-specific ETL logic among all the teams. The solution increases the consistency between teams and keeps the ETL pipelines up to date by minimizing duplicate effort and code.

With minor modifications, the migration utility can be reused to automate migration of pipelines during future AWS Glue version upgrades.

Conclusion

The successful outcome of this proof of concept has shown that migrating over 5,000 jobs from BMS’s custom application to native AWS services can deliver significant productivity gains and cost savings. By moving to AWS, BMS will be able to reduce the effort required to support AWS Glue, improve DevOps delivery, and save an estimated 58% on AWS Glue spend.

These results are very promising, and BMS is excited to embark on the next phase of the migration. We believe that this project will have a positive impact on BMS’s business and help us achieve our strategic goals.


About the authors

Sivaprasad Mahamkali is a Senior Streaming Data Engineer at AWS Professional Services. Siva leads customer engagements related to real-time streaming solutions, data lakes, analytics using opensource and AWS services. Siva enjoys listening to music and loves to spend time with his family.

Dan Gibbar is a Senior Engagement Manager at AWS Professional Services. Dan leads healthcare and life science engagements collaborating with customers and partners to deliver outcomes. Dan enjoys the outdoors, attempting triathlons, music and spending time with family.

Shrinath Parikh as a Senior Cloud Data Architect with AWS. He works with customers around the globe to assist them with their data analytics, data lake, data lake house, serverless, governance and NoSQL use cases. In Shrinath’s off time, he enjoys traveling, spending time with family and learning/building new tools using cutting edge technologies.

Ramesh Daddala is a Associate Director at BMS. Ramesh leads enterprise data engineering engagements related to enterprise data lake services (EDLs) and collaborating with Data partners to deliver and support enterprise data engineering and ML capabilities. Ramesh enjoys the outdoors, traveling and loves to spend time with family.

Jitendra Kumar Dash is a Senior Cloud Architect at BMS with expertise in hybrid cloud services, Infrastructure Engineering, DevOps, Data Engineering, and Data Analytics solutions. He is passionate about food, sports, and adventure.

Pavan Kumar Bijja is a Senior Data Engineer at BMS. Pavan enables data engineering and analytical services to BMS Commercial domain using enterprise capabilities. Pavan leads enterprise metadata capabilities at BMS. Pavan loves to spend time with his family, playing Badminton and Cricket.

Shovan Kanjilal is a Senior Data Lake Architect working with strategic accounts in AWS Professional Services. Shovan works with customers to design data and machine learning solutions on AWS.

How HR&A uses Amazon Redshift spatial analytics on Amazon Redshift Serverless to measure digital equity in states across the US

Post Syndicated from Harman Singh Dhodi original https://aws.amazon.com/blogs/big-data/how-hra-uses-amazon-redshift-spatial-analytics-on-amazon-redshift-serverless-to-measure-digital-equity-in-states-across-the-us/

In our increasingly digital world, affordable access to high-speed broadband is a necessity to fully participate in our society, yet there are still millions of American households without internet access. HR&A Advisors—a multi-disciplinary consultancy with extensive work in the broadband and digital equity space is helping its state, county, and municipal clients deliver affordable internet access by analyzing locally specific digital inclusion needs and building tailored digital equity plans.

The first step in this process is mapping the digital divide. Which households don’t have access to the internet at home? Where do they live? What are their specific needs?

Public data sources aren’t sufficient for building a true understanding of digital inclusion needs. To fill in the gaps in existing data, HR&A creates digital equity surveys to build a more complete picture before developing digital equity plans. HR&A has used Amazon Redshift Serverless and CARTO to process survey findings more efficiently and create custom interactive dashboards to facilitate understanding of the results. HR&A’s collaboration with Amazon Redshift and CARTO has resulted in a 75% reduction in overall deployment and dashboard management time and helped the team achieve the following technical goals:

  • Load survey results (CSV files) and geometry data (shape files) in a data warehouse
  • Perform geo-spatial transformations using extract, transform, and load (ELT) jobs to join geometry data with survey results within the data warehouse to allow for visualization of survey results on a map
  • Integrate with a business intelligence (BI) tool for advanced geo-spatial functions, visualizations, and mapping dashboards
  • Scale data warehouse capacity up or down to address workloads of varying complexity in a cost-efficient manner

In this post, we unpack how HR&A uses Amazon Redshift spatial analytics and CARTO for cost-effective geo-spatial measurement of digital inclusion and internet access across multiple US states.

Before we get to the architecture details, here is what HR&A and its client, Colorado’s Office of the Future of Work, has to say about the solution.

“Working with the team at HR&A Advisors, Colorado’s Digital Equity Team created a custom dashboard that allowed us to very effectively evaluate our reach while surveying historically marginalized populations across Colorado. This dynamic tool, powered by AWS and CARTO, provided robust visualizations of which regions and populations were interacting with our survey, enabling us to zoom in quickly and address gaps in coverage. Ensuring we were able to seek out data from those who are most impacted by the digital divide in Colorado has been vital to addressing digital inequities in our state.”

— Melanie Colletti, Digital Equity Manager at Colorado’s Office of the Future of Work

“AWS allows us to securely house all of our survey data in one place, quickly scrub and analyze it on Amazon Redshift, and mirror the results through integration with data visualization tools such as CARTO without the data ever leaving AWS. This frees up our local computer space, greatly automates the survey cleaning and analysis step, and allows our clients to easily access the data results. Following the proof of concept and development of first prototype, almost all of our state clients showed interest in using the same solution for their states.”

— Harman Singh Dhodi, Analyst at HR&A Advisors, Inc.

Storing and analyzing large survey datasets

HR&A used Redshift Serverless to store large amounts of digital inclusion data in one place and quickly transform and analyze it using CARTO’s analytical toolkit to extend the spatial capabilities of Amazon Redshift and integrate with CARTO’s data visualization tools—all without the data ever leaving the AWS environment. This cut down significantly on analytical turnaround times.

The CARTO Analytics Toolbox for Redshift is composed of a set of user-defined functions and procedures organized in a set of modules based on the functionality they offer.

The following figure shows the solution and workflow steps developed during the proof of concept with a virtual private cloud (VPC) on Amazon Redshift.

Figure 1: Workflow illustrating data ingesting, transformation, and visualization using Redshift and CARTO.

In the following sections, we discuss each phase in the workflow in more detail.

Data ingestion

HR&A receives survey data as wide CSV files with hundreds of columns in each file and related spatial data in hexadecimal Extended Well-Known Binary (EWKB) in the form of shape files. These files are stored in Amazon Simple Storage Service (Amazon S3).

The Redshift COPY command is used to ingest the spatial data from shape files into the native GEOMETRY data type supported in Amazon Redshift. A combination of Amazon Redshift Spectrum and COPY commands are used to ingest the survey data stored as CSV files. For the files with unknown structures, AWS Glue crawlers are used to extract metadata and create table definitions in the Data Catalog. These table definitions are used as the metadata repository for external tables in Amazon Redshift.

For files with known structures, a Redshift stored procedure is used, which takes the file location and table name as parameters and runs a COPY command to load the raw data into corresponding Redshift tables.

Data transformation

Multiple stored procedures are used to split the raw table data and load it into corresponding target tables while applying the user-defined transformations.

These transformation rules include transformation of GEOMETRY data using native Redshift geo-spatial functions, like ST_Area and ST_length, and CARTO’s advanced spatial functions, which are readily available in Amazon Redshift as part of the CARTO Analytics Toolbox for Redshift installation. Furthermore, all the data ingestion and transformation steps are automated using an AWS Lambda function to run the Redshift query when any dataset in Amazon S3 gets updated.

Data visualization

The HR&A team used CARTO’s Redshift connector to connect to the Redshift Serverless endpoint and built dashboards using CARTO’s SQL interface and widgets to assist mapping while performing dynamic calculations of the map data as per client needs.

The following are sample screenshots of the dashboards that show survey responses by zip code. The counties that are in lighter shades represent limited survey responses and need to be included in the targeted data collection strategy.

The first image shows the dashboard without any active filters. The second image shows filtered map and chats by respondents who took the survey in Spanish. The user can select and toggle between features by clicking on the respective category in any of the bar charts.

Figure 2: Illustrative Digital Equity Survey Dashboard for the State of Colorado. (© HR&A Advisors)

Figure 3: Illustrative Digital Equity Survey Dashboard for the State of Colorado, filtered for respondents who took the survey in Spanish language. (© HR&A Advisors)

The result: A new standard for automatically updating digital inclusion dashboards

After developing the first interactive dashboard prototype with this methodology, five of HR&A’s state clients (CA, TX, NV, CO, and MA) showed interest in the solution. HR&A was able to implement it for each of them within 2 months—an incredibly quick turnaround for a custom, interactive digital inclusion dashboard.

HR&A also realized about a 75% reduction in overall deployment and dashboard management time, which meant the consulting team could redirect their focus from manually analyzing data to helping clients interpret and strategically plan around the results. Finally, the dashboard’s user-friendly interface made survey data more accessible to a wider range of stakeholders. This helped build a shared understanding when assessing gaps in each state’s digital inclusion landscape and allowed for a targeted data collection strategy from areas with limited survey responses, thereby supporting more productive collaboration overall.

Conclusion

In this post, we showed how HR&A was able to analyze geo-spatial data in large volumes using Amazon Redshift Serverless and CARTO.

With HR&A’s successful implementation, it’s evident that Redshift Serverless, with its flexibility and scalability, can be used as a catalyst for positive social change. As HR&A continues to pave the way for digital equity, their story stands as a testament to how AWS services and its partners can be used in addressing real-world challenges.

We encourage you to explore Redshift Serverless with CARTO for analyzing spatial data and let us know your experience in the comments.


About the authors

Harman Singh Dhodi is an Analyst at HR&A Advisors, Harman combines his passion for data analytics with sustainable infrastructure practices, social inclusion, economic viability, climate resiliency, and building stakeholder capacity. Harman’s work often focuses on translating complex datasets into visual stories and accessible tools that help empower communities to understand the challenges they’re facing and create solutions for a brighter future.

Kiran Kumar Tati is an Analytics Specialist Solutions Architect based out of Omaha, NE. He specializes in building end-to-end analytic solutions. He has more than 13 years of experience with designing and implementing large scale Big Data and Analytics solutions. In his spare time, he enjoys playing cricket and watching sports.

Sapna Maheshwari is a Sr. Solutions Architect at Amazon Web Services. She helps customers architect data analytics solutions at scale on AWS. Outside of work she enjoys traveling and trying new cuisines.

Washim Nawaz is an Analytics Specialist Solutions Architect at AWS. He has worked on building and tuning data warehouse and data lake solutions for over 15 years. He is passionate about helping customers modernize their data platforms with efficient, performant, and scalable analytic solutions. Outside of work, he enjoys watching games and traveling.

Prepare and load Amazon S3 data into Teradata using AWS Glue through its native connector for Teradata Vantage

Post Syndicated from Vinod Jayendra original https://aws.amazon.com/blogs/big-data/prepare-and-load-amazon-s3-data-into-teradata-using-aws-glue-through-its-native-connector-for-teradata-vantage/

In this post, we explore how to use the AWS Glue native connector for Teradata Vantage to streamline data integrations and unlock the full potential of your data.

Businesses often rely on Amazon Simple Storage Service (Amazon S3) for storing large amounts of data from various data sources in a cost-effective and secure manner. For those using Teradata for data analysis, integrations through the AWS Glue native connector for Teradata Vantage unlock new possibilities. AWS Glue enhances the flexibility and efficiency of data management, allowing companies to seamlessly integrate their data, regardless of its location, with Teradata’s analytical capabilities. This new connector eliminates technical hurdles related to configuration, security, and management, enabling companies to effortlessly export or import their datasets into Teradata Vantage. As a result, businesses can focus more on extracting meaningful insights from their data, rather than dealing with the intricacies of data integration.

AWS Glue is a serverless data integration service that makes it straightforward for analytics users to discover, prepare, move, and integrate data from multiple sources for analytics, machine learning (ML), and application development. With AWS Glue, you can discover and connect to more than 100 diverse data sources and manage your data in a centralized data catalog. You can visually create, run, and monitor extract, transform, and load (ETL) pipelines to load data into your data lakes.

Teradata Corporation is a leading connected multi-cloud data platform for enterprise analytics, focused on helping companies use all their data across an enterprise, at scale. As an AWS Data & Analytics Competency partner, Teradata offers a complete cloud analytics and data platform, including for Machine Learning.

Introducing the AWS Glue native connector for Teradata Vantage

AWS Glue provides support for Teradata, accessible through both AWS Glue Studio and AWS Glue ETL scripts. With AWS Glue Studio, you benefit from a visual interface that simplifies the process of connecting to Teradata and authoring, running, and monitoring AWS Glue ETL jobs. For data developers, this support extends to AWS Glue ETL scripts, where you can use Python or Scala to create and manage more specific data integration and transformation tasks.

The AWS Glue native connector for Teradata Vantage allows you to efficiently read and write data from Teradata without the need to install or manage any connector libraries. You can add Teradata as both the source and target within AWS Glue Studio’s no-code, drag-and-drop visual interface or use the connector directly in an AWS Glue ETL script job.

Solution overview

In this example, you use AWS Glue Studio to enrich and upload data stored on Amazon S3 to Teradata Vantage. You start by joining the Event and Venue files from the TICKIT dataset. Next, you filter the results to a single geographic region. Finally, you upload the refined data to Teradata Vantage.

The TICKIT dataset tracks sales activity for the fictional TICKIT website, where users buy and sell tickets online for sporting events, shows, and concerts. In this dataset, analysts can identify ticket movement over time, success rates for sellers, and best-selling events, venues, and seasons.

For this example, you use AWS Glue Studio to develop a visual ETL pipeline. This pipeline will read data from Amazon S3, perform transformations, and then load the transformed data into Teradata. The following diagram illustrates this architecture.

Solution Overview

By the end of this post, your visual ETL job will resemble the following screenshot.

Visual ETL Job Flow

Prerequisites

For this example, you should have access to an existing Teradata database endpoint with network reachability from AWS and permissions to create tables and load and query data.

AWS Glue needs network access to Teradata to read or write data. How this is configured depends on where your Teradata is deployed and the specific network configuration. For Teradata deployed on AWS, you might need to configure VPC peering or AWS PrivateLink, security groups, and network access control lists (NACLs) to allow AWS Glue to communicate with Teradata overt TCP. If Teradata is outside AWS, networking services such as AWS Site-to-Site VPN or AWS Direct Connect may be required. Public internet access is not recommended due to security risks. If you choose public access, it’s safer to run the AWS Glue job in a VPC behind a NAT gateway. This approach enables you to allow list only one IP address for incoming traffic on your network firewall. For more information, refer to Infrastructure security in AWS Glue.

Set up Amazon S3

Every object in Amazon S3 is stored in a bucket. Before you can store data in Amazon S3, you must create an S3 bucket to store the results. Complete the following steps:

  1. On the Amazon S3 console, choose Buckets in the navigation pane.
  2. Choose Create bucket.
  3. For Name, enter a globally unique name for your bucket; for example, tickit8530923.
  4. Choose Create bucket.
  5. Download the TICKIT dataset and unzip it.
  6. Create the folder tickit in your S3 bucket and upload the allevents_pipe.txt and venue_pipe.txt files.

Configure Teradata connections

To connect to Teradata from AWS Glue, see Configuring Teradata Connection.

You must create and store your Teradata credentials in an AWS Secrets Manager secret and then associate that secret with a Teradata AWS Glue connection. We discuss these two steps in more detail later in this post.

Create an IAM role for the AWS Glue ETL job

When you create the AWS Glue ETL job, you specify an AWS Identity and Access Management (IAM) role for the job to use. The role must grant access to all resources used by the job, including Amazon S3 (for any sources, targets, scripts, driver files, and temporary directories) and Secrets Manager. For instructions, see Configure an IAM role for your ETL job.

Create table in Teradata

Using your preferred database tool, log in to Teradata. Run the following code to create the table in Teradata where you will load your data:

CREATE MULTISET TABLE test.tickit, FALLBACK
   (venueid varchar(25),
    venuename varchar(100),
    venuecity varchar(100),
    venuestate varchar(25),
    venueseats varchar(25),
    eventid varchar(25),
    catid varchar(25),
    dateid varchar(25),
    eventname varchar(100),
    starttime varchar(100))
    NO PRIMARY INDEX
;

Store Teradata login credentials

An AWS Glue connection is a Data Catalog object that stores login credentials, URI strings, and more. The Teradata connector requires Secrets Manager for storing the Teradata user name and password that you use to connect to Teradata.

To store the Teradata user name and password in Secrets Manager, complete the following steps:

  1. On the Secrets Manager console, choose Secrets in the navigation pane.
  2. Choose Store a new secret.
  3. Select Other type of secret.
  4. Enter the key/value USER and teradata_user, then choose Add row.
  5. Enter the key/value PASSWORD and teradata_user_password, then choose Next.

Teradata Secrets Manager Configuration

  1. For Secret name, enter a descriptive name, then choose Next.
  2. Choose Next to move to the review step, then choose Store.

Create the Teradata connection in AWS Glue

Now you’re ready to create an AWS Glue connection to Teradata. Complete the following steps:

  1. On the AWS Glue console, choose Connections under Data Catalog in the navigation pane.
  2. Choose Create connection.
  3. For Name, enter a name (for example, teradata_connection).
  4. For Connection type¸ choose Teradata.
  5. For Teradata URL, enter jdbc:teradata://url_of_teradata/database=name_of_your_database.
  6. For AWS Secret, choose the secret with your Teradata credentials that you created earlier.

Teradata Connection access

Create an AWS Glue visual ETL job to transform and load data to Teradata

Complete the following steps to create your AWS Glue ETL job:

  1. On the AWS Glue console, under ETL Jobs in the navigation pane, choose Visual ETL.
  2. Choose Visual ETL.
  3. Choose the pencil icon to enter a name for your job.

We add venue_pipe.txt as our first dataset.

  1. Choose Add nodes and choose Amazon S3 on the Sources tab.

Amazon S3 source node

  1. Enter the following data source properties:
    1. For Name, enter Venue.
    2. For S3 source type, select S3 location.
    3. For S3 URL, enter the S3 path to venue_pipe.txt.
    4. For Data format, choose CSV.
    5. For Delimiter, choose Pipe.
    6. Deselect First line of source file contains column headers.

S3 data source properties

Now we add allevents_pipe.txt as our second dataset.

  1. Choose Add nodes and choose Amazon S3 on the Sources tab.
  2. Enter the following data source properties:
    1. For Name, enter Event.
    2. For S3 source type, select S3 location.
    3. For S3 URL, enter the S3 path to allevents_pipe.txt.
    4. For Data format, choose CSV.
    5. For Delimiter, choose Pipe.
    6. Deselect First line of source file contains column headers.

Next, we rename the columns of the Venue dataset.

  1. Choose Add nodes and choose Change Schema on the Transforms tab.
  2. Enter the following transform properties:
    1. For Name, enter Rename Venue data.
    2. For Node parents, choose Venue.
    3. In the Change Schema section, map the source keys to the target keys:
      1. col0: venueid
      2. col1: venuename
      3. col2: venuecity
      4. col3: venuestate
      5. col4: venueseats

Rename Venue data ETL Transform

Now we filter the Venue dataset to a specific geographic region.

  1. Choose Add nodes and choose Filter on the Transforms tab.
  2. Enter the following transform properties:
    1. For Name, enter Location Filter.
    2. For Node parents, choose Venue.
    3. For Filter condition, choose venuestate for Key, choose matches for Operation, and enter DC for Value.

Location Filter Settings

Now we rename the columns in the Event dataset.

  1. Choose Add nodes and choose Change Schema on the Transforms tab.
  2. Enter the following transform properties:
    1. For Name, enter Rename Event data.
    2. For Node parents, choose Event.
    3. In the Change Schema section, map the source keys to the target keys:
      1. col0: eventid
      2. col1: e_venueid
      3. col2: catid
      4. col3: dateid
      5. col4: eventname
      6. col5: starttime

Next, we join the Venue and Event datasets.

  1. Choose Add nodes and choose Join on the Transforms tab.
  2. Enter the following transform properties:
    1. For Name, enter Join.
    2. For Node parents, choose Location Filter and Rename Event data.
    3. For Join type¸ choose Inner join.
    4. For Join conditions, choose venueid for Location Filter and e_venueid for Rename Event data.

Join Properties

Now we drop the duplicate column.

  1. Choose Add nodes and choose Change Schema on the Transforms tab.
  2. Enter the following transform properties:
    1. For Name, enter Drop column.
    2. For Node parents, choose Join.
    3. In the Change Schema section, select Drop for e_venueid .

Drop column properties

Next, we load the data into the Teradata table.

  1. Choose Add nodes and choose Teradata on the Targets tab.
  2. Enter the following data sink properties:
    1. For Name, enter Teradata.
    2. For Node parents, choose Drop column.
    3. For Teradata connection, choose teradata_connection.
    4. For Table name, enter schema.tablename of the table you created in Teradata.

Data sink properties Teradata

Lastly, we run the job and load the data into Teradata.

  1. Choose Save, then choose Run.

A banner will display that the job has started.

  1. Choose Runs, which displays the status of the job.

The run status will change to Succeeded when the job is complete.

Run Status

  1. Connect to your Teradata and then query the table the data was loaded to it.

The filtered and joined data from the two datasets will be in the table.

Filtered and joined data result

Clean up

To avoid incurring additional charges caused by resources created as part of this post, make sure you delete the items you created in the AWS account for this post:

  • The Secrets Manager key created for the Teradata credentials
  • The AWS Glue native connector for Teradata Vantage
  • The data loaded in the S3 bucket
  • The AWS Glue Visual ETL job

Conclusion

In this post, you created a connection to Teradata using AWS Glue and then created an AWS Glue job to transform and load data into Teradata. The AWS Glue native connector for Teradata Vantage empowers your data analytics journey by providing a seamless and efficient pathway for integrating your data with Teradata. This new capability in AWS Glue not only simplifies your data integration workflows but also opens up new avenues for advanced analytics, business intelligence, and machine learning innovations.

With the AWS Teradata Connector, you have the best tool at your disposal for simplifying data integration tasks. Whether you’re looking to load Amazon S3 data into Teradata for analytics, reporting, or business insights, this new connector streamlines the process, making it more accessible and cost-effective.

To get started with AWS Glue, refer to Getting Started with AWS Glue.


About the Authors

Kamen Sharlandjiev is a Sr. Big Data and ETL Solutions Architect and AWS Glue expert. He’s on a mission to make life easier for customers who are facing complex data integration challenges. His secret weapon? Fully managed, low-code AWS services that can get the job done with minimal effort and no coding. Follow Kamen on LinkedIn to keep up to date with the latest AWS Glue news!

Sean Bjurstrom is a Technical Account Manager in ISV accounts at Amazon Web Services, where he specializes in analytics technologies and draws on his background in consulting to support customers on their analytics and cloud journeys. Sean is passionate about helping businesses harness the power of data to drive innovation and growth. Outside of work, he enjoys running and has participated in several marathons.

Vinod Jayendra is an Enterprise Support Lead in ISV accounts at Amazon Web Services, where he helps customers solve their architectural, operational, and cost-optimization challenges. With a particular focus on serverless technologies, he draws from his extensive background in application development to help customers build top-tier solutions. Beyond work, he finds joy in quality family time, embarking on biking adventures, and coaching youth sports teams.

Doug Mbaya is a Senior Partner Solution architect with a focus in analytics and machine learning. Doug works closely with AWS partners and helps them integrate their solutions with AWS analytics and machine learning solutions in the cloud.

Build and manage your modern data stack using dbt and AWS Glue through dbt-glue, the new “trusted” dbt adapter

Post Syndicated from Noritaka Sekiyama original https://aws.amazon.com/blogs/big-data/build-and-manage-your-modern-data-stack-using-dbt-and-aws-glue-through-dbt-glue-the-new-trusted-dbt-adapter/

dbt is an open source, SQL-first templating engine that allows you to write repeatable and extensible data transforms in Python and SQL. dbt focuses on the transform layer of extract, load, transform (ELT) or extract, transform, load (ETL) processes across data warehouses and databases through specific engine adapters to achieve extract and load functionality. It enables data engineers, data scientists, and analytics engineers to define the business logic with SQL select statements and eliminates the need to write boilerplate data manipulation language (DML) and data definition language (DDL) expressions. dbt lets data engineers quickly and collaboratively deploy analytics code following software engineering best practices like modularity, portability, continuous integration and continuous delivery (CI/CD), and documentation.

dbt is predominantly used by data warehouses (such as Amazon Redshift) customers who are looking to keep their data transform logic separate from storage and engine. We have seen a strong customer demand to expand its scope to cloud-based data lakes because data lakes are increasingly the enterprise solution for large-scale data initiatives due to their power and capabilities.

In 2022, AWS published a dbt adapter called dbt-glue—the open source, battle-tested dbt AWS Glue adapter that allows data engineers to use dbt for cloud-based data lakes along with data warehouses and databases, paying for just the compute they need. The dbt-glue adapter democratized access for dbt users to data lakes, and enabled many users to effortlessly run their transformation workloads on the cloud with the serverless data integration capability of AWS Glue. From the launch of the adapter, AWS has continued investing into dbt-glue to cover more requirements.

Today, we are pleased to announce that the dbt-glue adapter is now a trusted adapter based on our strategic collaboration with dbt Labs. Trusted adapters are adapters not maintained by dbt Labs, but adaptors that that dbt Lab is comfortable recommending to users for use in production.

The key capabilities of the dbt-glue adapter are as follows:

  • Runs SQL as Spark SQL on AWS Glue interactive sessions
  • Manages table definitions on the AWS Glue Data Catalog
  • Supports open table formats such as Apache Hudi, Delta Lake, and Apache Iceberg
  • Supports AWS Lake Formation permissions for fine-grained access control

In addition to those capabilities, the dbt-glue adapter is designed to optimize resource utilization with several techniques on top of AWS Glue interactive sessions.

This post demonstrates how the dbt-glue adapter helps your workload, and how you can build a modern data stack using dbt and AWS Glue using the dbt-glue adapter.

Common use cases

One common use case for using dbt-glue is if a central analytics team at a large corporation is responsible for monitoring operational efficiency. They ingest application logs into raw Parquet tables in an Amazon Simple Storage Service (Amazon S3) data lake. Additionally, they extract organized data from operational systems capturing the company’s organizational structure and costs of diverse operational components that they stored in the raw zone using Iceberg tables to maintain the original schema, facilitating easy access to the data. The team uses dbt-glue to build a transformed gold model optimized for business intelligence (BI). The gold model joins the technical logs with billing data and organizes the metrics per business unit. The gold model uses Iceberg’s ability to support data warehouse-style modeling needed for performant BI analytics in a data lake. The combination of Iceberg and dbt-glue allows the team to efficiently build a data model that’s ready to be consumed.

Another common use case is when an analytics team in a company that has an S3 data lake creates a new data product in order to enrich its existing data from its data lake with medical data. Let’s say that this company is located in Europe and the data product must comply with the GDPR. For this, the company uses Iceberg to meet needs such as the right to be forgotten and the deletion of data. The company uses dbt to model its data product on its existing data lake due to its compatibility with AWS Glue and Iceberg and the simplicity that the dbt-glue adapter brings to the use of this storage format.

How dbt and dbt-glue work

The following are key dbt features:

  • Project – A dbt project enforces a top-level structure on the staging, models, permissions, and adapters. A project can be checked into a GitHub repo for version control.
  • SQL – dbt relies on SQL select statements for defining data transformation logic. Instead of raw SQL, dbt offers templatized SQL (using Jinja) that allows code modularity. Instead of having to copy/paste SQL in multiple places, data engineers can define modular transforms and call those from other places within the project. Having a modular pipeline helps data engineers collaborate on the same project.
  • Models – dbt models are primarily written as a SELECT statement and saved as a .sql file. Data engineers define dbt models for their data representations. To learn more, refer to About dbt models.
  • Materializations – Materializations are strategies for persisting dbt models in a warehouse. There are five types of materializations built into dbt: table, view, incremental, ephemeral, and materialized view. To learn more, refer to Materializations and Incremental models.
  • Data lineage – dbt tracks data lineage, allowing you to understand the origin of data and how it flows through different transformations. dbt also supports impact analysis, which helps identify the downstream effects of changes.

The high-level data flow is as follows:

  1. Data engineers ingest data from data sources to raw tables and define table definitions for the raw tables.
  2. Data engineers write dbt models with templatized SQL.
  3. The dbt adapter converts dbt models to SQL statements compatible in a data warehouse.
  4. The data warehouse runs the SQL statements to create intermediate tables or final tables, views, or materialized views.

The following diagram illustrates the architecture.

dbt-glue works with the following steps:

  1. The dbt-glue adapter converts dbt models to SQL statements compatible in Spark SQL.
  2. AWS Glue interactive sessions run the SQL statements to create intermediate tables or final tables, views, or materialized views.
  3. dbt-glue supports csv, parquet, hudi, delta, and iceberg as fileformat.
  4. On the dbt-glue adapter, table or incremental are commonly used for materializations at the destination. There are three strategies for incremental materialization. The merge strategy requires hudi, delta, or iceberg. With the other two strategies, append and insert_overwrite, you can use csv, parquet, hudi, delta, or iceberg.

The following diagram illustrates this architecture.

Example use case

In this post, we use the data from the New York City Taxi Records dataset. This dataset is available in the Registry of Open Data on AWS (RODA), which is a repository containing public datasets from AWS resources. The raw Parquet table records in this dataset stores trip records.

The objective is to create the following three tables, which contain metrics based on the raw table:

  • silver_avg_metrics – Basic metrics based on NYC Taxi Open Data for the year 2016
  • gold_passengers_metrics – Metrics per passenger based on the silver metrics table
  • gold_cost_metrics – Metrics per cost based on the silver metrics table

The final goal is to create two well-designed gold tables that store already aggregated results in Iceberg format for ad hoc queries through Amazon Athena.

Prerequisites

The instruction requires following prerequisites:

  • An AWS Identity and Access Management (IAM) role with all the mandatory permissions to run an AWS Glue interactive session and the dbt-glue adapter
  • An AWS Glue database and table to store the metadata related to the NYC taxi records dataset
  • An S3 bucket to use as output and store the processed data
  • An Athena configuration (a workgroup and S3 bucket to store the output) to explore the dataset
  • An AWS Lambda function (created as an AWS CloudFormation custom resource) that updates all the partitions in the AWS Glue table

With these prerequisites, we simulate the situation that data engineers have already ingested data from data sources to raw tables, and defined table definitions for the raw tables.

For ease of use, we prepared a CloudFormation template. This template deploys all the required infrastructure. To create these resources, choose Launch Stack in the us-east-1 Region, and follow the instructions:

Install dbt, the dbt CLI, and the dbt adaptor

The dbt CLI is a command line interface for running dbt projects. It’s free to use and available as an open source project. Install dbt and the dbt CLI with the following code:

$ pip3 install --no-cache-dir dbt-core

For more information, refer to How to install dbt, What is dbt?, and Viewpoint.

Install the dbt adapter with the following code:

$ pip3 install --no-cache-dir dbt-glue

Create a dbt project

Complete the following steps to create a dbt project:

  1. Run the dbt init command to create and initialize a new empty dbt project:
    $ dbt init

  2. For the project name, enter dbt_glue_demo.
  3. For the database, choose glue.

Now the empty project has been created. The directory structure is shown as follows:

$ cd dbt_glue_demo 
$ tree .
.
├── README.md
├── analyses
├── dbt_project.yml
├── macros
├── models
│   └── example
│       ├── my_first_dbt_model.sql
│       ├── my_second_dbt_model.sql
│       └── schema.yml
├── seeds
├── snapshots
└── tests

Create a source

The next step is to create a source table definition. We add models/source_tables.yml with the following contents:

version: 2

sources:
  - name: data_source
    schema: nyctaxi

    tables:
      - name: records

This source definition corresponds to the AWS Glue table nyctaxi.records, which we created in the CloudFormation stack.

Create models

In this step, we create a dbt model that represents the average values for trip duration, passenger count, trip distance, and total amount of charges. Complete the following steps:

  1. Create the models/silver/ directory.
  2. Create the file models/silver/silver_avg_metrics.sql with the following contents:
    WITH source_avg as ( 
        SELECT avg((CAST(dropoff_datetime as LONG) - CAST(pickup_datetime as LONG))/60) as avg_duration 
        , avg(passenger_count) as avg_passenger_count 
        , avg(trip_distance) as avg_trip_distance 
        , avg(total_amount) as avg_total_amount
        , year
        , month 
        , type
        FROM {{ source('data_source', 'records') }} 
        WHERE year = "2016"
        AND dropoff_datetime is not null 
        GROUP BY year, month, type
    ) 
    SELECT *
    FROM source_avg

  3. Create the file models/silver/schema.yml with the following contents:
    version: 2
    
    models:
      - name: silver_avg_metrics
        description: This table has basic metrics based on NYC Taxi Open Data for the year 2016
    
        columns:
          - name: avg_duration
            description: The average duration of a NYC Taxi trip
    
          - name: avg_passenger_count
            description: The average number of passenger per NYC Taxi trip
    
          - name: avg_trip_distance
            description: The average NYC Taxi trip distance
    
          - name: avg_total_amount
            description: The avarage amount of a NYC Taxi trip
    
          - name: year
            description: The year of the NYC Taxi trip
    
          - name: month
            description: The month of the NYC Taxi trip 
    
          - name: type
            description: The type of the NYC Taxi 

  4. Create the models/gold/ directory.
  5. Create the file models/gold/gold_cost_metrics.sql with the following contents:
    {{ config(
        materialized='incremental',
        incremental_strategy='merge',
        unique_key=["year", "month", "type"],
        file_format='iceberg',
        iceberg_expire_snapshots='False',
        table_properties={'format-version': '2'}
    ) }}
    SELECT (avg_total_amount/avg_trip_distance) as avg_cost_per_distance
    , (avg_total_amount/avg_duration) as avg_cost_per_minute
    , year
    , month 
    , type 
    FROM {{ ref('silver_avg_metrics') }}

  6. Create the file models/gold/gold_passengers_metrics.sql with the following contents:
    {{ config(
        materialized='incremental',
        incremental_strategy='merge',
        unique_key=["year", "month", "type"],
        file_format='iceberg',
        iceberg_expire_snapshots='False',
        table_properties={'format-version': '2'}
    ) }}
    SELECT (avg_total_amount/avg_passenger_count) as avg_cost_per_passenger
    , (avg_duration/avg_passenger_count) as avg_duration_per_passenger
    , (avg_trip_distance/avg_passenger_count) as avg_trip_distance_per_passenger
    , year
    , month 
    , type 
    FROM {{ ref('silver_avg_metrics') }}

  7. Create the file models/gold/schema.yml with the following contents:
    version: 2
    
    models:
      - name: gold_cost_metrics
        description: This table has metrics per cost based on NYC Taxi Open Data
    
        columns:
          - name: avg_cost_per_distance
            description: The average cost per distance of a NYC Taxi trip
    
          - name: avg_cost_per_minute
            description: The average cost per minute of a NYC Taxi trip
    
          - name: year
            description: The year of the NYC Taxi trip
    
          - name: month
            description: The month of the NYC Taxi trip
    
          - name: type
            description: The type of the NYC Taxi
    
      - name: gold_passengers_metrics
        description: This table has metrics per passenger based on NYC Taxi Open Data
    
        columns:
          - name: avg_cost_per_passenger
            description: The average cost per passenger for a NYC Taxi trip
    
          - name: avg_duration_per_passenger
            description: The average number of passenger per NYC Taxi trip
    
          - name: avg_trip_distance_per_passenger
            description: The average NYC Taxi trip distance
    
          - name: year
            description: The year of the NYC Taxi trip
    
          - name: month
            description: The month of the NYC Taxi trip 
    
          - name: type
            description: The type of the NYC Taxi

  8. Remove the models/example/ folder, because it’s just an example created in the dbt init command.

Configure the dbt project

dbt_project.yml is a key configuration file for dbt projects. It contains the following code:

models:
  dbt_glue_demo:
    # Config indicated by + and applies to all files under models/example/
    example:
      +materialized: view

We configure dbt_project.yml to replace the preceding code with the following:

models:
  dbt_glue_demo:
    silver:
      +materialized: table

This is because that we want to materialize the models under silver as Parquet tables.

Configure a dbt profile

A dbt profile is a configuration that specifies how to connect to a particular database. The profiles are defined in the profiles.yml file within a dbt project.

Complete the following steps to configure a dbt profile:

  1. Create the profiles directory.
  2. Create the file profiles/profiles.yml with the following contents:
    dbt_glue_demo:
      target: dev
      outputs:
        dev:
          type: glue
          query-comment: demo-nyctaxi
          role_arn: "{{ env_var('DBT_ROLE_ARN') }}"
          region: us-east-1
          workers: 5
          worker_type: G.1X
          schema: "dbt_glue_demo_nyc_metrics"
          database: "dbt_glue_demo_nyc_metrics"
          session_provisioning_timeout_in_seconds: 120
          location: "{{ env_var('DBT_S3_LOCATION') }}"

  3. Create the profiles/iceberg/ directory.
  4. Create the file profiles/iceberg/profiles.yml with the following contents:
    dbt_glue_demo:
      target: dev
      outputs:
        dev:
          type: glue
          query-comment: demo-nyctaxi
          role_arn: "{{ env_var('DBT_ROLE_ARN') }}"
          region: us-east-1
          workers: 5
          worker_type: G.1X
          schema: "dbt_glue_demo_nyc_metrics"
          database: "dbt_glue_demo_nyc_metrics"
          session_provisioning_timeout_in_seconds: 120
          location: "{{ env_var('DBT_S3_LOCATION') }}"
          datalake_formats: "iceberg"
          conf: --conf spark.sql.catalog.glue_catalog=org.apache.iceberg.spark.SparkCatalog --conf spark.sql.catalog.glue_catalog.warehouse="{{ env_var('DBT_S3_LOCATION') }}"warehouse/ --conf spark.sql.catalog.glue_catalog.catalog-impl=org.apache.iceberg.aws.glue.GlueCatalog --conf spark.sql.catalog.glue_catalog.io-impl=org.apache.iceberg.aws.s3.S3FileIO --conf spark.sql.extensions=org.apache.iceberg.spark.extensions.IcebergSparkSessionExtensions"

The last two lines are added for setting Iceberg configurations on AWS Glue interactive sessions.

Run the dbt project

Now it’s time to run the dbt project. Complete the following steps:

  1. To run the project dbt, you should be in the project folder:
    $ cd dbt_glue_demo

  2. The project requires you to set environment variables in order to run on the AWS account:
    $ export DBT_ROLE_ARN="arn:aws:iam::$(aws sts get-caller-identity --query "Account" --output text):role/GlueInteractiveSessionRole"
    $ export DBT_S3_LOCATION="s3://aws-dbt-glue-datalake-$(aws sts get-caller-identity --query "Account" --output text)-us-east-1"

  3. Make sure the profile is set up correctly from the command line:
    $ dbt debug --profiles-dir profiles
    ...
    05:34:22 Connection test: [OK connection ok]
    05:34:22 All checks passed!

If you see any failures, check if you provided the correct IAM role ARN and S3 location in Step 2.

  1. Run the models with the following code:
    $ dbt run -m silver --profiles-dir profiles
    $ dbt run -m gold --profiles-dir profiles/iceberg/

Now the tables are successfully created in the AWS Glue Data Catalog, and the data is materialized in the Amazon S3 location.

You can verify those tables by opening the AWS Glue console, choosing Databases in the navigation pane, and opening dbt_glue_demo_nyc_metrics.

Query materialized tables through Athena

Let’s query the target table using Athena to verify the materialized tables. Complete the following steps:

  1. On the Athena console, switch the workgroup to athena-dbt-glue-aws-blog.
  2. If the workgroup athena-dbt-glue-aws-blog settings dialog box appears, choose Acknowledge.
  3. Use the following query to explore the metrics created by the dbt project:
    SELECT cm.avg_cost_per_minute
        , cm.avg_cost_per_distance
        , pm.avg_cost_per_passenger
        , cm.year
        , cm.month
        , cm.type
    FROM "dbt_glue_demo_nyc_metrics"."gold_passengers_metrics" pm
    LEFT JOIN "dbt_glue_demo_nyc_metrics"."gold_cost_metrics" cm
        ON cm.type = pm.type
        AND cm.year = pm.year
        AND cm.month = pm.month
    WHERE cm.type = 'yellow'
        AND cm.year = '2016'
        AND cm.month = '6'

The following screenshot shows the results of this query.

Review dbt documentation

Complete the following steps to review your documentation:

  1. Generate the following documentation for the project:
    $ dbt docs generate --profiles-dir profiles/iceberg
    11:41:51  Running with dbt=1.7.1
    11:41:51  Registered adapter: glue=1.7.1
    11:41:51  Unable to do partial parsing because profile has changed
    11:41:52  Found 3 models, 1 source, 0 exposures, 0 metrics, 478 macros, 0 groups, 0 semantic models
    11:41:52  
    11:41:53  Concurrency: 1 threads (target='dev')
    11:41:53  
    11:41:53  Building catalog
    11:43:32  Catalog written to /Users/username/Documents/workspace/dbt_glue_demo/target/catalog.json

  2. Run the following command to open the documentation on your browser:
    $ dbt docs serve --profiles-dir profiles/iceberg

  3. In the navigation pane, choose gold_cost_metrics under dbt_glue_demo/models/gold.

You can see the detailed view of the model gold_cost_metrics, as shown in the following screenshot.

  1. To see the lineage graph, choose the circle icon at the bottom right.

Clean up

To clean up your environment, complete the following steps:

  1. Delete the database created by dbt:
    $ aws glue delete-database —name dbt_glue_demo_nyc_metrics

  2. Delete all generated data:
    $ aws s3 rm s3://aws-dbt-glue-datalake-$(aws sts get-caller-identity —query "Account" —output text)-us-east-1/ —recursive
    $ aws s3 rm s3://aws-athena-dbt-glue-query-results-$(aws sts get-caller-identity —query "Account" —output text)-us-east-1/ —recursive

  3. Delete the CloudFormation stack:
    $ aws cloudformation delete-stack —stack-name dbt-demo

Conclusion

This post demonstrated how the dbt-glue adapter helps your workload, and how you can build a modern data stack using dbt and AWS Glue using the dbt-glue adapter. You learned the end-to-end operations and data flow for data engineers to build and manage a data stack using dbt and the dbt-glue adapter. To report issues or request a feature enhancement, feel free to open an issue on GitHub.


About the authors

Noritaka Sekiyama is a Principal Big Data Architect on the AWS Glue team at Amazon Web Services. He works based in Tokyo, Japan. He is responsible for building software artifacts to help customers. In his spare time, he enjoys cycling with his road bike.

Benjamin Menuet is a Senior Data Architect on the AWS Professional Services team at Amazon Web Services. He helps customers develop data and analytics solutions to accelerate their business outcomes. Outside of work, Benjamin is a trail runner and has finished some iconic races like the UTMB.

Akira Ajisaka is a Senior Software Development Engineer on the AWS Glue team. He likes open source software and distributed systems. In his spare time, he enjoys playing arcade games.

Kinshuk Pahare is a Principal Product Manager on the AWS Glue team at Amazon Web Services.

Jason Ganz is the manager of the Developer Experience (DX) team at dbt Labs

Use anomaly detection with AWS Glue to improve data quality (preview)

Post Syndicated from Jeff Barr original https://aws.amazon.com/blogs/aws/use-anomaly-detection-with-aws-glue-to-improve-data-quality-preview/

We are launching a preview of a new AWS Glue Data Quality feature that will help to improve your data quality by using machine learning to detect statistical anomalies and unusual patterns. You get deep insights into data quality issues, data quality scores, and recommendations for rules that you can use to continuously monitor for anomalies, all without having to write any code.

Data quality counts
AWS customers already build data integration pipelines to extract and transform data. They set up data quality rules to ensure that the resulting data is of high quality and can be used to make accurate business decisions. In many cases, these rules assess the data based on criteria that were chosen and locked in at a specific point in time, reflecting the current state of the business. However, as the business environment changes and the properties of the data shift, the rules are not always reviewed and updated.

For example, a rule could be set to verify that daily sales are at least ten thousand dollars for an early-stage business. As the business succeeds and grows, the rule should be checked and updated from time to time, but in practice this rarely happens. As a result, if there’s an unexpected drop in sales, the outdated rule does not activate, and no one is happy.

Anomaly detection in action
To detect unusual patterns and to gain deeper insights into data, organizations try to create their own adaptive systems or turn to costly commercial solutions that require specific technical skills and specialized business knowledge.

To address this widespread challenge, Glue Data Quality now makes use of machine learning (ML).

Once activated, this cool new addition to Glue Data Quality gathers statistics as fresh data arrives, using ML and dynamic thresholds to learn from past patterns while looking outliers and unusual data patterns. This process produces observations and also visualizes trends so that you can quickly gain a better understanding of the anomaly.

You will also get rule recommendations as part of the Observations, and you can easily and progressively add them to your data pipelines. Rules can enforce an action such as stopping your data pipelines. In the past, you could only write static rules. Now, you can write Dynamic rules that have auto-adjusting thresholds and AnomalyDetection Rules that grasp recurring patterns and spot deviations. When you use rules as part of data pipelines, they can stop the data flow so that a data engineer can review, fix and resume.

To use anomaly detection, I add an Evaluate Data Quality node to my job:

I select the node and click Add analyzer to choose a statistic and the columns:

Glue Data Quality learns from the data to recognize patterns and then generates observations that will be shown in the Data quality tab:

And a visualization:

After I review the observations I add new rules. The first one sets adaptive thresholds that check the row count is between the smallest of the last 10 runs and the largest of the last 20 runs. The second one looks for unusual patters, for example RowCount being abnormally high on weekends:

Join the preview
This new capability is available in preview in the following AWS Regions: US East (Ohio), US East (N. Virginia), US West (Oregon), Asia Pacific (Tokyo), and Europe (Ireland). To learn more, read Data Quality Anomaly Detection]].

Stay tuned for a detailed blog post when this feature launches!

Learn more

Data Quality Anomaly Detection

— Jeff;

Enhance query performance using AWS Glue Data Catalog column-level statistics

Post Syndicated from Sandeep Adwankar original https://aws.amazon.com/blogs/big-data/enhance-query-performance-using-aws-glue-data-catalog-column-level-statistics/

Today, we’re making available a new capability of AWS Glue Data Catalog that allows generating column-level statistics for AWS Glue tables. These statistics are now integrated with the cost-based optimizers (CBO) of Amazon Athena and Amazon Redshift Spectrum, resulting in improved query performance and potential cost savings.

Data lakes are designed for storing vast amounts of raw, unstructured, or semi-structured data at a low cost, and organizations share those datasets across multiple departments and teams. The queries on these large datasets read vast amounts of data and can perform complex join operations on multiple datasets. When talking with our customers, we learned that one the challenging aspect of data lake performance is how to optimize these analytics queries to execute faster.

The data lake performance optimization is especially important for queries with multiple joins and that is where cost-based optimizers helps the most. In order for CBO to work, column statistics need to be collected and updated based on changes in the data. We’re launching capability of generating column-level statistics such as number of distinct, number of nulls, max, and min on files such as Parquet, ORC, JSON, Amazon ION, CSV, XML on AWS Glue tables. With this launch, customers now have integrated end-to-end experience where statistics on Glue tables are collected and stored in the AWS Glue Catalog, and made available to analytics services for improved query planning and execution.

Using these statistics, cost-based optimizers improves query run plans and boosts the performance of queries run in Amazon Athena and Amazon Redshift Spectrum. For example, CBO can use column statistics such as number of distinct values and number of nulls to improve row prediction. Row prediction is the number of rows from a table that will be returned by a certain step during the query planning stage. The more accurate the row predictions are, the more efficient query execution steps are. This leads to faster query execution and potentially reduced cost. Some of the specific optimizations that CBO can employ include join reordering and push-down of aggregations based on the statistics available for each table and column.

For customers using data mesh with AWS Lake Formation permissions, tables from different data producers are cataloged in the centralized governance accounts. As they generate statistics on tables on centralized catalog and share those tables with consumers, queries on those tables in consumer accounts will see query performance improvements automatically. In this post, we’ll demonstrate the capability of AWS Glue Data Catalog to generate column statistics for our sample tables.

Solution overview

To demonstrate the effectiveness of this capability, we employ the industry-standard TPC-DS 3 TB dataset stored in an Amazon Simple Storage Service (Amazon S3) public bucket. We’ll compare the query performance before and after generating column statistics for the tables, by running queries in Amazon Athena and Amazon Redshift Spectrum. We are providing queries that we used in this post and we encourage to try out your own queries following workflow as illustrated in the following details.

The workflow consists of the following high level steps:

  1. Cataloging the Amazon S3 Bucket: Utilize AWS Glue Crawler to crawl the designated Amazon S3 bucket, extracting metadata, and seamlessly storing it in the AWS Glue data catalog. We’ll query these tables using Amazon Athena and Amazon Redshift Spectrum.
  2. Generating column statistics: Employ the enhanced capabilities of AWS Glue Data Catalog to generate comprehensive column statistics for the crawled data, thereby providing valuable insights into the dataset.
  3. Querying with Amazon Athena and Amazon Redshift Spectrum: Evaluate the impact of column statistics on query performance by utilizing Amazon Athena and Amazon Redshift Spectrum to execute queries on the dataset.

The following diagram illustrates the solution architecture.

Walkthrough

To implement the solution, we complete the following steps:

  1. Set up resources with AWS CloudFormation.
  2. Run AWS Glue Crawler on Public Amazon S3 bucket to list the 3TB TPC-DS dataset.
  3. Run queries on Amazon Athena and Amazon Redshift and note down query duration
  4. Generate statistics for AWS Glue Data Catalog tables
  5. Run queries on Amazon Athena and Amazon Redshift and compare query duration with previous run
  6. Optional: Schedule AWS Glue column statistics jobs using AWS Lambda and the Amazon EventBridge Scheduler

Set up resources with AWS CloudFormation

This post includes an AWS CloudFormation template for a quick setup. You can review and customize it to suit your needs. The template generates the following resources:

  • An Amazon Virtual Private Cloud (Amazon VPC), public subnet, private subnets and route tables.
  • An Amazon Redshift Serverless workgroup and namespace.
  • An AWS Glue crawler to crawl the public Amazon S3 bucket and create a table for the Glue Data Catalog for TPC-DS dataset
  • AWS Glue catalog databases and tables
  • An Amazon S3 bucket to store athena result.
  • AWS Identity and Access Management (AWS IAM) users and policies.
  • AWS Lambda and Amazon Event Bridge scheduler to schedule the AWS Glue Column statistics

To launch the AWS CloudFormation stack, complete the following steps:

Note: The AWS Glue data catalog tables are generated using the public bucket s3://blogpost-sparkoneks-us-east-1/blog/BLOG_TPCDS-TEST-3T-partitioned/, hosted in the us-east-1 region. If you intend to deploy this AWS CloudFormation template in a different region, it is necessary to either copy the data to the corresponding region or share the data within your deployed region for it to be accessible from Amazon Redshift.

  1. Log in to the AWS Management Console as AWS Identity and Access Management (AWS IAM) administrator.
  2. Choose Launch Stack to deploy a AWS CloudFormation template.
  3. Choose Next.
  4. On the next page, keep all the option as default or make appropriate changes based on your requirement choose Next.
  5. Review the details on the final page and select I acknowledge that AWS CloudFormation might create IAM resources.
  6. Choose Create.

This stack can take around 10 minutes to complete, after which you can view the deployed stack on the AWS CloudFormation console.

Run the AWS Glue Crawlers created by the AWS CloudFormation stack

To run your crawlers, complete the following steps:

  1. On the AWS Glue console to AWS Glue Console, choose Crawlers under Data Catalog in the navigation pane.
  2. Locate and run two crawlers tpcdsdb-without-stats and tpcdsdb-with-stats. It may take few mins to complete.

Once the crawler completes successfully, it would create two identical databases tpcdsdbnostats and tpcdsdbwithstats. The tables in tpcdsdbnostats will have No Stats and we’ll use them as reference. We generate statistics on tables in tpcdsdbwithstats. Please verify that you have those two databases and underlying tables from the AWS Glue Console. The tpcdsdbnostats database will look like below. At this time there are no statistics generated on these tables.

Run provided query using Amazon Athena on no-stats tables

To run your query in Amazon Athena on tables without statistics, complete the following steps:

  1. Download the athena queries from here.
  2. On the Amazon Athena Console, choose the provided query one at a time for tables in database tpcdsdbnostats.
  3. Run the query and note down the Run time for each query.

Run provided query using Amazon Redshift Spectrum on no-stats tables

To run your query in Amazon Redshift, complete the following steps:

  1. Download the Amazon Redshift queries from here.
  2. On the Redshift query editor v2, execute the Redshift Query for tables without stats section from downloaded query.
  3. Run the query and note down the query execution of each query.

Generate statistics on AWS Glue Catalog tables

To generate statistics on AWS Glue Catalog tables, complete the following steps:

  1. Navigate to the AWS Glue Console and choose the databases under Data Catalog.
  2. Click on tpcdsdbwithstats database and it will list all the available tables.
  3. Select any of these tables (e.g., call_center).
  4. Go to Column statistics – new tab and choose Generate statistics.
  5. Keep the default option. Under Choose columns keep Table (All columns) and Under Row sampling options Keep All rows, Under IAM role choose AWSGluestats-blog and select Generate statistics.

You’ll be able to see status of the statistics generation run as shown in the following illustration:

After generate statistics on AWS Glue Catalog tables, you should be able to see detailed column statistics for that table:

Reiterate steps 2–5 to generate statistics for all necessary tables, such as catalog_sales, catalog_returns, warehouse, item, date_dim, store_sales, customer, customer_address, web_sales, time_dim, ship_mode, web_site, web_returns. Alternatively, you can follow the “Schedule AWS Glue Statistics Runs” section near the end of this blog to generate statistics for all tables. Once done, assess query performance for each query.

Run provided query using Athena Console on stats tables

  1. On the Amazon Athena console, execute the Athena Query for tables with stats section from downloaded query.
  2. Run and note down the query execution of each query.

In our sample run of the queries on the tables, we observed the query execution time as per the below table. We saw clear improvement in the query performance, ranging from 13 to 55%.

Athena query time improvement

TPC-DS 3T Queries without glue stats (sec) with glue stats (sec) performance improvement (%)
Query 2 33.62 15.17 55%
Query 4 132.11 72.94 45%
Query 14 134.77 91.48 32%
Query 28 55.99 39.36 30%
Query 38 29.32 25.58 13%

Run the provided query using Amazon Redshift Spectrum on statistics tables

  1. On the Amazon Redshift query editor v2, execute the Redshift Query for tables with stats section from downloaded query.
  2. Run the query and note down the query execution of each query.

In our sample run of the queries on the tables, we observed the query execution time as per the below table. We saw clear improvement in the query performance, ranging from 13 to 89%.

Amazon Redshift Spectrum query time improvement

TPC-DS 3T Queries without glue stats (sec) with glue stats (sec) performance improvement (%)
Query 40 124.156 13.12 89%
Query 60 29.52 16.97 42%
Query 66 18.914 16.39 13%
Query 95 308.806 200 35%
Query 99 20.064 16 20%

Schedule AWS Glue statistics Runs

In this segment of the post, we’ll guide you through the steps of scheduling AWS Glue column statistics runs using AWS Lambda and the Amazon EventBridge Scheduler. To streamline this process, a AWS Lambda function and an Amazon EventBridge scheduler were created as part of the CloudFormation stack deployment.

  1. AWS Lambda function setup:

To begin, we utilize an AWS Lambda function to trigger the execution of the AWS Glue column statistics job. The AWS Lambda function invokes the start_column_statistics_task_run API through the boto3 (AWS SDK for Python) library. This sets the groundwork for automating the column statistics update.

Let’s explore the AWS Lambda function:

    • Go to the AWS Glue Lambda Console.
    • Select Functions and locate the GlueTableStatisticsFunctionv1.
    • For a clearer understanding of the AWS Lambda function, we recommend reviewing the code in the Code section and examining the environment variables under Configuration.
  1. Amazon EventBridge scheduler configuration

The next step involves scheduling the AWS Lambda function invocation using the Amazon EventBridge Scheduler. The scheduler is configured to trigger the AWS Lambda function daily at a specific time – in this case, 08:00 PM. This ensures that the AWS Glue column statistics job runs on a regular and predictable basis.

Now, let’s explore how you can update the schedule:

Cleaning up

To avoid unwanted charges to your AWS account, delete the AWS resources:

  1. Sign into the AWS CloudFormation console as the AWS IAM administrator used for creating the AWS CloudFormation stack.
  2. Delete the AWS CloudFormation stack you created.

Conclusion

In this post, we showed you how you can use AWS Glue Data Catalog to generate column-level statistics for AWS Glue tables. These statistics are now integrated with cost-based optimizer from Amazon Athena and Amazon Redshift Spectrum, resulting in improved query performance and potential costs savings. Refer to Docs for support for Glue Catalog Statistics across various AWS analytical services.

If you have questions or suggestions, submit them in the comments section.


About the Authors

Sandeep Adwankar is a Senior Technical Product Manager at AWS. Based in the California Bay Area, he works with customers around the globe to translate business and technical requirements into products that enable customers to improve how they manage, secure, and access data.

Navnit Shukla serves as an AWS Specialist Solution Architect with a focus on Analytics. He possesses a strong enthusiasm for assisting clients in discovering valuable insights from their data. Through his expertise, he constructs innovative solutions that empower businesses to arrive at informed, data-driven choices. Notably, Navnit Shukla is the accomplished author of the book titled Data Wrangling on AWS. He can be reached via LinkedIn.

Introducing Apache Hudi support with AWS Glue crawlers

Post Syndicated from Noritaka Sekiyama original https://aws.amazon.com/blogs/big-data/introducing-apache-hudi-support-with-aws-glue-crawlers/

Apache Hudi is an open table format that brings database and data warehouse capabilities to data lakes. Apache Hudi helps data engineers manage complex challenges, such as managing continuously evolving datasets with transactions while maintaining query performance. Data engineers use Apache Hudi for streaming workloads as well as to create efficient incremental data pipelines. Hudi provides tables, transactions, efficient upserts and deletes, advanced indexes, streaming ingestion services, data clustering and compaction optimizations, and concurrency control, all while keeping your data in open source file formats. Hudi’s advanced performance optimizations make analytical workloads faster with any of the popular query engines including Apache Spark, Presto, Trino, Hive, and so on.

Many AWS customers adopted Apache Hudi on their data lakes built on top of Amazon S3 using AWS Glue, a serverless data integration service that makes it easier to discover, prepare, move, and integrate data from multiple sources for analytics, machine learning (ML), and application development. AWS Glue Crawler is a component of AWS Glue, which allows you to create table metadata from data content automatically without requiring manual definition of the metadata.

AWS Glue crawlers now support Apache Hudi tables, simplifying the adoption of AWS Glue Data Catalog as the catalog for Hudi tables. One typical use case is to register Hudi tables, which does not have catalog table definition. Another typical use case is migration from other Hudi catalogs, such as Hive metastore. When migrating from other Hudi Catalogs, you can create and schedule an AWS Glue crawler and provide one or more Amazon S3 paths where the Hudi table files are located. You have the option to provide the maximum depth of Amazon S3 paths that the AWS Glue crawler can traverse. With each run, AWS Glue crawlers will extract schema and partition information and update AWS Glue Data Catalog with the schema and partition changes. AWS Glue crawlers updates the latest metadata file location in the AWS Glue Data Catalog that AWS analytical engines can directly use.

With this launch, you can create and schedule an AWS Glue crawler to register Hudi tables in AWS Glue Data Catalog. You can then provide one or multiple Amazon S3 paths where the Hudi tables are located. You have the option to provide the maximum depth of Amazon S3 paths that crawlers can traverse. With each crawler run, the crawler inspects each of the S3 paths and catalogs the schema information, such as new tables, deletes, and updates to schemas in the AWS Glue Data Catalog. Crawlers inspect partition information and add newly added partitions to AWS Glue Data Catalog. Crawlers also update the latest metadata file location in the AWS Glue Data Catalog that AWS analytical engines can directly use.

This post demonstrates how this new capability to crawl Hudi tables works.

How AWS Glue crawler works with Hudi tables

Hudi tables have two categories, with specific implications for each:

  • Copy on write (CoW) – Data is stored in a columnar format (Parquet), and each update creates a new version of files during a write.
  • Merge on read (MoR) – Data is stored using a combination of columnar (Parquet) and row-based (Avro) formats. Updates are logged to row-based delta files and are compacted as needed to create new versions of the columnar files.

With CoW datasets, each time there is an update to a record, the file that contains the record is rewritten with the updated values. With a MoR dataset, each time there is an update, Hudi writes only the row for the changed record. MoR is better suited for write- or change-heavy workloads with fewer reads. CoW is better suited for read-heavy workloads on data that change less frequently.

Hudi provides three query types for accessing the data:

  • Snapshot queries – Queries that see the latest snapshot of the table as of a given commit or compaction action. For MoR tables, snapshot queries expose the most recent state of the table by merging the base and delta files of the latest file slice at the time of the query.
  • Incremental queries – Queries only see new data written to the table, since a given commit or compaction. This effectively provides change streams to enable incremental data pipelines.
  • Read optimized queries – For MoR tables, queries see the latest data compacted. For CoW tables, queries see the latest data committed.

For copy-on-write tables, crawlers create a single table in the AWS Glue Data Catalog with the ReadOptimized Serde  org.apache.hudi.hadoop.HoodieParquetInputFormat.

For merge-on-read tables, crawlers create two tables in AWS Glue Data Catalog for the same table location:

  • A table with suffix _ro, which uses the ReadOptimized Serde org.apache.hudi.hadoop.HoodieParquetInputFormat
  • A table with suffix _rt, which uses the RealTime Serde allowing for Snapshot queries: org.apache.hudi.hadoop.realtime.HoodieParquetRealtimeInputFormat

During each crawl, for each Hudi path provided, crawlers make an Amazon S3 list API call, filter based on the .hoodie folders, and find the most recent metadata file under that Hudi table metadata folder.

Crawl a Hudi CoW table using AWS Glue crawler

In this section, let’s go through how to crawl a Hudi CoW using AWS Glue crawlers.

Prerequisites

Here are the prerequisites for this tutorial:

  1. Install and configure AWS Command Line Interface (AWS CLI).
  2. Create your S3 bucket if you do not have it.
  3. Create your IAM role for AWS Glue if you do not have it. You need s3:GetObject for s3://your_s3_bucket/data/sample_hudi_cow_table/.
  4. Run the following command to copy the sample Hudi table into your S3 bucket. (Replace your_s3_bucket with your S3 bucket name.)
$ aws s3 sync s3://aws-bigdata-blog/artifacts/hudi-crawler/product_cow/ s3://your_s3_bucket/data/sample_hudi_cow_table/

This instruction guides you to copy sample data, but you can create any Hudi tables easily using AWS Glue. Learn more in Introducing native support for Apache Hudi, Delta Lake, and Apache Iceberg on AWS Glue for Apache Spark, Part 2: AWS Glue Studio Visual Editor.

Create a Hudi crawler

In this instruction, create the crawler through the console. Complete the following steps to create a Hudi crawler:

  1. On the AWS Glue console, choose Crawlers.
  2. Choose Create crawler.
  3. For Name, enter hudi_cow_crawler. Choose Next.
  4. Under Data source configuration,  choose Add data source.
    1. For Data source, choose Hudi.
    2. For Include hudi table paths, enter s3://your_s3_bucket/data/sample_hudi_cow_table/. (Replace your_s3_bucket with your S3 bucket name.)
    3. Choose Add Hudi data source.
  5. Choose Next.
  6. For Existing IAM role, choose your IAM role, then choose Next.
  7. For Target database, choose Add database, then the Add database dialog appears. For Database name, enter hudi_crawler_blog, then choose Create. Choose Next.
  8. Choose Create crawler.

Now a new Hudi crawler has been successfully created. The crawler can be triggered to run through the console or through the SDK or AWS CLI using the StartCrawl API. It could also be scheduled through the console to trigger the crawlers at specific times. In this instruction, run the crawler through the console.

  1. Choose Run crawler.
  2. Wait for the crawler to complete.

After the crawler has run, you can see the Hudi table definition in the AWS Glue console:

You have successfully crawled the Hudi CoR table with data on Amazon S3 and created an AWS Glue Data Catalog table with the schema populated. After you create the table definition on AWS Glue Data Catalog, AWS analytics services such as Amazon Athena are able to query the Hudi table.

Complete the following steps to start queries on Athena:

  1. Open the Amazon Athena console.
  2. Run the following query.
SELECT * FROM "hudi_crawler_blog"."sample_hudi_cow_table" limit 10;

The following screenshot shows our output:

Crawl a Hudi MoR table using AWS Glue crawler with AWS Lake Formation data permissions

In this section, let’s go through how to crawl a Hudi MoR table using AWS Glue. This time, you use AWS Lake Formation data permission for crawling Amazon S3 data sources instead of IAM and Amazon S3 permission. This is optional, but it simplifies permission configurations when your data lake is managed by AWS Lake Formation permissions.

Prerequisites

Here are the prerequisites for this tutorial:

  1. Install and configure AWS Command Line Interface (AWS CLI).
  2. Create your S3 bucket if you do not have it.
  3. Create your IAM role for AWS Glue if you do not have it. You need lakeformation:GetDataAccess. But you do not need s3:GetObject for s3://your_s3_bucket/data/sample_hudi_mor_table/ because we use Lake Formation data permission to access the files.
  4. Run the following command to copy the sample Hudi table into your S3 bucket. (Replace your_s3_bucket with your S3 bucket name.)
$ aws s3 sync s3://aws-bigdata-blog/artifacts/hudi-crawler/product_mor/ s3://your_s3_bucket/data/sample_hudi_mor_table/

In addition to the processing steps, complete the following steps to update the AWS Glue Data Catalog settings to use Lake Formation permissions to control catalog resources instead of IAM-based access control:

  1. Sign in to the Lake Formation console as a data lake administrator.
    1. If this is the first time accessing the Lake Formation console, add yourself as the data lake administrator.
  2. Under Administration, choose Data catalog settings.
  3. For Default permissions for newly created databases and tables, deselect Use only IAM access control for new databases and Use only IAM access control for new tables in new databases.
  4. For Cross account version setting, choose Version 3.
  5. Choose Save.

The next step is to register your S3 bucket in Lake Formation data lake locations:

  1. On the Lake Formation console, choose Data lake locations, and choose Register location.
  2. For Amazon S3 path, enter s3://your_s3_bucket/. (Replace your_s3_bucket with your S3 bucket name.)
  3. Choose Register location.

Then, grant Glue crawler role access to data location so that the crawler can use Lake Formation permission to access the data and create tables in the location:

  1. On the Lake Formation console, choose Data locations and choose Grant.
  2. For IAM users and roles, select the IAM role you used for the crawler.
  3. For Storage location, enter s3://your_s3_bucket/data/. (Replace your_s3_bucket with your S3 bucket name.)
  4. Choose Grant.

Then, grant crawler role to create tables under the database hudi_crawler_blog:

  1. On the Lake Formation console, choose Data lake permissions.
  2. Choose Grant.
  3. For Principals, choose IAM users and roles, and choose the crawler role.
  4. For LF tags or catalog resources, choose Named data catalog resources.
  5. For Database, choose the database hudi_crawler_blog.
  6. Under Database permissions, select Create table.
  7. Choose Grant.

Create a Hudi crawler with Lake Formation data permissions

Complete the following steps to create a Hudi crawler:

  1. On the AWS Glue console, choose Crawlers.
  2. Choose Create crawler.
  3. For Name, enter hudi_mor_crawler. Choose Next.
  4. Under Data source configuration,  choose Add data source.
    1. For Data source, choose Hudi.
    2. For Include hudi table paths, enter s3://your_s3_bucket/data/sample_hudi_mor_table/. (Replace your_s3_bucket with your S3 bucket name.)
    3. Choose Add Hudi data source.
  5. Choose Next.
  6. For Existing IAM role, choose your IAM role.
  7. Under Lake Formation configuration – optional, select Use Lake Formation credentials for crawling S3 data source.
  8. Choose Next.
  9. For Target database, choose hudi_crawler_blog. Choose Next.
  10. Choose Create crawler.

Now a new Hudi crawler has been successfully created. The crawler uses Lake Formation credentials for crawling Amazon S3 files. Let’s run the new crawler:

  1. Choose Run crawler.
  2. Wait for the crawler to complete.

After the crawler has run, you can see two tables of the Hudi table definition in the AWS Glue console:

  • sample_hudi_mor_table_ro (read optimized table)
  • sample_hudi_mor_table_rt (real time table)

You registered the data lake bucket with Lake Formation and enabled crawling access to the data lake using Lake Formation permissions. You have successfully crawled the Hudi MoR table with data on Amazon S3 and created an AWS Glue Data Catalog table with the schema populated. After you create the table definitions on AWS Glue Data Catalog, AWS analytics services such as Amazon Athena are able to query the Hudi table.

Complete the following steps to start queries on Athena:

  1. Open the Amazon Athena console.
  2. Run the following query.
    SELECT * FROM "hudi_crawler_blog"."sample_hudi_mor_table_rt" limit 10;

The following screenshot shows our output:

  1. Run the following query.
    SELECT * FROM "hudi_crawler_blog"."sample_hudi_mor_table_ro" limit 10;

The following screenshot shows our output:

Fine-grained access control using AWS Lake Formation permissions

To apply fine-grained access control on the Hudi table, you can benefit from AWS Lake Formation permissions. Lake Formation permissions allow you to restrict access to specific tables, columns, or rows and then query the Hudi tables through Amazon Athena with fine-grained access control. Let’s configure Lake Formation permission for the Hudi MoR table.

Prerequisites

Here are the prerequisites for this tutorial:

  1. Complete the previous section Crawl a Hudi MoR table using AWS Glue crawler with AWS Lake Formation data permissions.
  2. Create an IAM user DataAnalyst, who has AWS managed policy AmazonAthenaFullAccess.

Create a Lake Formation data cell filter

Let’s first set up a filter for the MoR read optimized table.

  1. Sign in to the Lake Formation console as a data lake administrator.
  2. Choose Data filters.
  3. Choose Create new filter.
  4. For Data filter name, enter exclude_product_price.
  5. For Target database, choose the database hudi_crawler_blog.
  6. For Target table, choose the table sample_hudi_mor_table_ro.
  7. For Column-level access, select Exclude columns, and choose the column price.
  8. For Row filter expression, enter true.
  9. Choose Create filter.

Grant Lake Formation permissions to the DataAnalyst user

Complete the following steps to grant Lake Formation permission to the DataAnalyst user

  1. On the Lake Formation console, choose Data lake permissions.
  2. Choose Grant.
  3. For Principals, choose IAM users and roles, and choose the user DataAnalyst.
  4. For LF tags or catalog resources, choose Named data catalog resources.
  5. For Database, choose the database hudi_crawler_blog.
  6. For Table – optional, choose the table sample_hudi_mor_table_ro.
  7. For Data filters – optional, select exclude_product_price.
  8. For Data filter permissions, select Select.
  9. Choose Grant.

You granted Lake Formation permission on the database hudi_crawler_blog and the table sample_hudi_mor_table_ro, excluding the column price to the DataAnalyst user. Now let’s validate user access to the data using Athena.

  1. Sign in to the Athena console as a DataAnalyst user.
  2. On the query editor, run the following query:
    SELECT * FROM "hudi_crawler_blog"."sample_hudi_mor_table_ro" limit 10;

The following screenshot shows our output:

Now you validated that the column price is not shown, but the other columns product_id, product_name, update_at, and category are shown.

Clean up

To avoid unwanted charges to your AWS account, delete the following AWS resources:

  1. Delete AWS Glue database hudi_crawler_blog.
  2. Delete AWS Glue crawlers hudi_cow_crawler and hudi_mor_crawler.
  3. Delete Amazon S3 files under s3://your_s3_bucket/data/sample_hudi_cow_table/ and s3://your_s3_bucket/data/sample_hudi_mor_table/.

Conclusion

This post demonstrated how AWS Glue crawlers work for Hudi tables. With the support for Hudi crawler, you can quickly move to using AWS Glue Data Catalog as your primary Hudi table catalog. You can start building your serverless transactional data lake using Hudi on AWS using AWS Glue, AWS Glue Data Catalog, and Lake Formation fine-grained access controls for tables and formats supported by AWS analytical engines.


About the authors

Noritaka Sekiyama is a Principal Big Data Architect on the AWS Glue team. He works based in Tokyo, Japan. He is responsible for building software artifacts to help customers. In his spare time, he enjoys cycling with his road bike.

Kyle Duong is a Software Development Engineer on the AWS Glue and Lake Formation team. He is passionate about building big data technologies and distributed systems.

Sandeep Adwankar is a Senior Technical Product Manager at AWS. Based in the California Bay Area, he works with customers around the globe to translate business and technical requirements into products that enable customers to improve how they manage, secure, and access data.

Enhance monitoring and debugging for AWS Glue jobs using new job observability metrics

Post Syndicated from Noritaka Sekiyama original https://aws.amazon.com/blogs/big-data/enhance-monitoring-and-debugging-for-aws-glue-jobs-using-new-job-observability-metrics/

For any modern data-driven company, having smooth data integration pipelines is crucial. These pipelines pull data from various sources, transform it, and load it into destination systems for analytics and reporting. When running properly, it provides timely and trustworthy information. However, without vigilance, the varying data volumes, characteristics, and application behavior can cause data pipelines to become inefficient and problematic. Performance can slow down or pipelines can become unreliable. Undetected errors result in bad data and impact downstream analysis. That’s why robust monitoring and troubleshooting for data pipelines is essential across the following four areas:

  • Reliability
  • Performance
  • Throughput
  • Resource utilization

Together, these four aspects of monitoring provide end-to-end visibility and control over a data pipeline and its operations.

Today we are pleased to announce a new class of Amazon CloudWatch metrics reported with your pipelines built on top of AWS Glue for Apache Spark jobs. The new metrics provide aggregate and fine-grained insights into the health and operations of your job runs and the data being processed. In addition to providing insightful dashboards, the metrics provide classification of errors, which helps with root cause analysis of performance bottlenecks and error diagnosis. With this analysis, you can evaluate and apply the recommended fixes and best practices for architecting your jobs and pipelines. As a result, you gain the benefit of higher availability, better performance, and lower cost for your AWS Glue for Apache Spark workload.

This post demonstrates how the new enhanced metrics help you monitor and debug AWS Glue jobs.

Enable the new metrics

The new metrics can be configured through the job parameter enable-observability-metrics.

The new metrics are enabled by default on the AWS Glue Studio console. To configure the metrics on the AWS Glue Studio console, complete the following steps:

  1. On the AWS Glue console, choose ETL jobs in the navigation pane.
  2. Under Your jobs, choose your job.
  3. On the Job details tab, expand Advanced properties.
  4. Under Job observability metrics, select Enable the creation of additional observability CloudWatch metrics when this job runs.

To enable the new metrics in the AWS Glue CreateJob and StartJobRun APIs, set the following parameters in the DefaultArguments property:

  • Key – --enable-observability-metrics
  • Value – true

To enable the new metrics in the AWS Command Line Interface (AWS CLI), set the same job parameters in the --default-arguments argument.

Use case

A typical workload for AWS Glue for Apache Spark jobs is to load data from a relational database to a data lake with SQL-based transformations. The following is a visual representation of an example job where the number of workers is 10.

When the example job ran, the workerUtilization metrics showed the following trend.

Note that workerUtilization showed values between 0.20 (20%) and 0.40 (40%) for the entire duration. This typically happens when the job capacity is over-provisioned and many Spark executors were idle, resulting in unnecessary cost. To improve resource utilization efficiency, it’s a good idea to enable AWS Glue Auto Scaling. The following screenshot shows the same workerUtilization metrics graph when AWS Glue Auto Scaling is enabled for the same job.

workerUtilization showed 1.0 in the beginning because of AWS Glue Auto Scaling and it trended between 0.75 (75%) and 1.0 (100%) based on the workload requirements.

Query and visualize metrics in CloudWatch

Complete the following steps to query and visualize metrics on the CloudWatch console:

  1. On the CloudWatch console, choose All metrics in the navigation pane.
  2. Under Custom namespaces, choose Glue.
  3. Choose Observability Metrics (or Observability Metrics Per Source, or Observability Metrics Per Sink).
  4. Search for and select the specific metric name, job name, job run ID, and observability group.
  5. On the Graphed metrics tab, configure your preferred statistic, period, and so on.

Query metrics using the AWS CLI

Complete the following steps for querying using the AWS CLI (for this example, we query the worker utilization metric):

  1. Create a metric definition JSON file (provide your AWS Glue job name and job run ID):
    $ cat multiplequeries.json
    [
      {
        "Id": "avgWorkerUtil_0",
        "MetricStat" : {
          "Metric" : {
            "Namespace": "Glue",
            "MetricName": "glue.driver.workerUtilization",
            "Dimensions": [
              {
                  "Name": "JobName",
                  "Value": "<your-Glue-job-name-A>"
              },
              {
                "Name": "JobRunId",
                "Value": "<your-Glue-job-run-id-A>"
              },
              {
                "Name": "Type",
                "Value": "gauge"
              },
              {
                "Name": "ObservabilityGroup",
                "Value": "resource_utilization"
              }
            ]
          },
          "Period": 1800,
          "Stat": "Minimum",
          "Unit": "None"
        }
      },
      {
          "Id": "avgWorkerUtil_1",
          "MetricStat" : {
          "Metric" : {
            "Namespace": "Glue",
            "MetricName": "glue.driver.workerUtilization",
            "Dimensions": [
               {
                 "Name": "JobName",
                 "Value": "<your-Glue-job-name-B>"
               },
               {
                 "Name": "JobRunId",
                 "Value": "<your-Glue-job-run-id-B>"
               },
               {
                 "Name": "Type",
                 "Value": "gauge"
               },
               {
                 "Name": "ObservabilityGroup",
                 "Value": "resource_utilization"
               }
            ]
          },
          "Period": 1800,
          "Stat": "Minimum",
          "Unit": "None"
        }
      }
    ]

  2. Run the get-metric-data command:
    $ aws cloudwatch get-metric-data --metric-data-queries file://multiplequeries.json \
         --start-time '2023-10-28T18:20' \
         --end-time '2023-10-28T19:10'  \
         --region us-east-1
    {
        "MetricDataResults": [
          {
             "Id": "avgWorkerUtil_0",
             "Label": "<your label A>",
             "Timestamps": [
                   "2023-10-28T18:20:00+00:00"
             ], 
             "Values": [
                   0.06718750000000001
             ],
             "StatusCode": "Complete"
          },
          {
             "Id": "avgWorkerUtil_1",
             "Label": "<your label B>",
             "Timestamps": [
                  "2023-10-28T18:20:00+00:00"
              ],
              "Values": [
                  0.5959183673469387
              ],
              "StatusCode": "Complete"
           }
        ],
        "Messages": []
    }

Create a CloudWatch alarm

You can create static threshold-based alarms for the different metrics. For instructions, refer to Create a CloudWatch alarm based on a static threshold.

For example, for skewness, you can set an alarm for skewness.stage with a threshold of 1.0, and skewness.job with a threshold of 0.5. This threshold is just a recommendation; you can adjust the threshold based on your specific use case (for example, some jobs are expected to be skewed and it’s not an issue to be alarmed for). Our recommendation is to evaluate the metric values of your job runs for some time before qualifying the anomalous values and configuring the thresholds to alarm.

Other enhanced metrics

For a full list of other enhanced metrics available with AWS Glue jobs, refer to Monitoring with AWS Glue Observability metrics. These metrics allow you to capture the operational insights of your jobs, such as resource utilization (memory and disk), normalized error classes such as compilation and syntax, user or service errors, and throughput for each source or sink (records, files, partitions, and bytes read or written).

Job observability dashboards

You can further simplify observability for your AWS Glue jobs using dashboards for the insight metrics that enable real-time monitoring using Amazon Managed Grafana, and enable visualization and analysis of trends with Amazon QuickSight.

Conclusion

This post demonstrated how the new enhanced CloudWatch metrics help you monitor and debug AWS Glue jobs. With these enhanced metrics, you can more easily identify and troubleshoot issues in real time. This results in AWS Glue jobs that experience higher uptime, faster processing, and reduced expenditures. The end benefit for you is more effective and optimized AWS Glue for Apache Spark workloads. The metrics are available in all AWS Glue supported Regions. Check it out!


About the Authors

Noritaka Sekiyama is a Principal Big Data Architect on the AWS Glue team. He is responsible for building software artifacts to help customers. In his spare time, he enjoys cycling with his new road bike.

Shenoda Guirguis is a Senior Software Development Engineer on the AWS Glue team. His passion is in building scalable and distributed Data Infrastructure/Processing Systems. When he gets a chance, Shenoda enjoys reading and playing soccer.

Sean Ma is a Principal Product Manager on the AWS Glue team. He has an 18+ year track record of innovating and delivering enterprise products that unlock the power of data for users. Outside of work, Sean enjoys scuba diving and college football.

Mohit Saxena is a Senior Software Development Manager on the AWS Glue team. His team focuses on building distributed systems to enable customers with interactive and simple to use interfaces to efficiently manage and transform petabytes of data seamlessly across data lakes on Amazon S3, databases and data-warehouses on cloud.

Introducing AWS Glue serverless Spark UI for better monitoring and troubleshooting

Post Syndicated from Noritaka Sekiyama original https://aws.amazon.com/blogs/big-data/introducing-aws-glue-studio-serverless-spark-ui-for-better-monitoring-and-troubleshooting/

In AWS, hundreds of thousands of customers use AWS Glue, a serverless data integration service, to discover, combine, and prepare data for analytics and machine learning. When you have complex datasets and demanding Apache Spark workloads, you may experience performance bottlenecks or errors during Spark job runs. Troubleshooting these issues can be difficult and delay getting jobs working in production. Customers often use Apache Spark Web UI, a popular debugging tool that is part of open source Apache Spark, to help fix problems and optimize job performance. AWS Glue supports Spark UI in two different ways, but you need to set it up yourself. This requires time and effort spent managing networking and EC2 instances, or through trial-and error with Docker containers.

Today, we are pleased to announce serverless Spark UI built into the AWS Glue console. You can now use Spark UI easily as it’s a built-in component of the AWS Glue console, enabling you to access it with a single click when examining the details of any given job run. There’s no infrastructure setup or teardown required. AWS Glue serverless Spark UI is a fully-managed serverless offering and generally starts up in a matter of seconds. Serverless Spark UI makes it significantly faster and easier to get jobs working in production because you have ready access to low level details for your job runs.

This post describes how the AWS Glue serverless Spark UI helps you to monitor and troubleshoot your AWS Glue job runs.

Getting started with serverless Spark UI

You can access the serverless Spark UI for a given AWS Glue job run by navigating from your Job’s page in AWS Glue console.

  1. On the AWS Glue console, choose ETL jobs.
  2. Choose your job.
  3. Choose the Runs tab.
  4. Select the job run you want to investigate, then choose Spark UI.

The Spark UI will display in the lower pane, as shown in the following screen capture:

Alternatively, you can get to the serverless Spark UI for a specific job run by navigating from Job run monitoring in AWS Glue.

  1. On the AWS Glue console, choose job run monitoring under ETL jobs.
  2. Select your job run, and choose View run details.

Scroll down to the bottom to view the Spark UI for the job run.

Prerequisites

Complete the following prerequisite steps:

  1. Enable Spark UI event logs for your job runs. It is enabled by default on Glue console and once enabled, Spark event log files will be created during the job run, and stored in your S3 bucket. The serverless Spark UI parses a Spark event log file generated in your S3 bucket to visualize detailed information for both running and completed job runs. A progress bar shows the percentage to completion, with a typical parsing time of less than a minute. Once logs are parsed, you can
  2. When logs are parsed, you can use the built-in Spark UI to debug, troubleshoot, and optimize your jobs.

For more information about Apache Spark UI, refer to Web UI in Apache Spark.

Monitor and Troubleshoot with Serverless Spark UI

A typical workload for AWS Glue for Apache Spark jobs is loading data from relational databases to S3-based data lakes. This section demonstrates how to monitor and troubleshoot an example job run for the above workload with serverless Spark UI. The sample job reads data from MySQL database and writes to S3 in Parquet format. The source table has approximately 70 million records.

The following screen capture shows a sample visual job authored in AWS Glue Studio visual editor. In this example, the source MySQL table has already been registered in the AWS Glue Data Catalog in advance. It can be registered through AWS Glue crawler or AWS Glue catalog API. For more information, refer to Data Catalog and crawlers in AWS Glue.

Now it’s time to run the job! The first job run finished in 30 minutes and 10 seconds as shown:

Let’s use Spark UI to optimize the performance of this job run. Open Spark UI tab in the Job runs page. When you drill down to Stages and view the Duration column, you will notice that Stage Id=0 spent 27.41 minutes to run the job, and the stage had only one Spark task in the Tasks:Succeeded/Total column. That means there was no parallelism to load data from the source MySQL database.

To optimize the data load, introduce parameters called hashfield and hashpartitions to the source table definition. For more information, refer to Reading from JDBC tables in parallel. Continuing to the Glue Catalog table, add two properties: hashfield=emp_no, and hashpartitions=18 in Table properties.

This means the new job runs reading parallelize data load from the source MySQL table.

Let’s try running the same job again! This time, the job run finished in 9 minutes and 9 seconds. It saved 21 minutes from the previous job run.

As a best practice, view the Spark UI and compare them before and after the optimization. Drilling down to Completed stages, you will notice that there was one stage and 18 tasks instead of one task.

In the first job run, AWS Glue automatically shuffled data across multiple executors before writing to destination because there were too few tasks. On the other hand, in the second job run, there was only one stage because there was no need to do extra shuffling, and there were 18 tasks for loading data in parallel from source MySQL database.

Considerations

Keep in mind the following considerations:

  • Serverless Spark UI is supported in AWS Glue 3.0 and later
  • Serverless Spark UI will be available for jobs that ran after November 20, 2023, due to a change in how AWS Glue emits and stores Spark logs
  • Serverless Spark UI can visualize Spark event logs which is up to 1 GB in size
  • There is no limit in retention because serverless Spark UI scans the Spark event log files on your S3 bucket
  • Serverless Spark UI is not available for Spark event logs stored in S3 bucket that can only be accessed by your VPC

Conclusion

This post described how the AWS Glue serverless Spark UI helps you monitor and troubleshoot your AWS Glue jobs. By providing instant access to the Spark UI directly within the AWS Management Console, you can now inspect the low-level details of job runs to identify and resolve issues. With the serverless Spark UI, there is no infrastructure to manage—the UI spins up automatically for each job run and tears down when no longer needed. This streamlined experience saves you time and effort compared to manually launching Spark UIs yourself.

Give the serverless Spark UI a try today. We think you’ll find it invaluable for optimizing performance and quickly troubleshooting errors. We look forward to hearing your feedback as we continue improving the AWS Glue console experience.


About the authors

Noritaka Sekiyama is a Principal Big Data Architect on the AWS Glue team. He works based in Tokyo, Japan. He is responsible for building software artifacts to help customers. In his spare time, he enjoys cycling on his road bike.

Alexandra Tello is a Senior Front End Engineer with the AWS Glue team in New York City. She is a passionate advocate for usability and accessibility. In her free time, she’s an espresso enthusiast and enjoys building mechanical keyboards.

Matt Sampson is a Software Development Manager on the AWS Glue team. He loves working with his other Glue team members to make services that our customers benefit from. Outside of work, he can be found fishing and maybe singing karaoke.

Matt Su is a Senior Product Manager on the AWS Glue team. He enjoys helping customers uncover insights and make better decisions using their data with AWS Analytic services. In his spare time, he enjoys skiing and gardening.

AWS Weekly Roundup – EC2 DL2q instances, PartyRock, Amplify’s 6th birthday, and more – November 20, 2023

Post Syndicated from Channy Yun original https://aws.amazon.com/blogs/aws/aws-weekly-roundup-ec2-dl2q-instances-partyrock-amplifys-6th-birthday-and-more-november-20-2023/

Last week I saw an astonishing 160+ new service launches. There were so many updates that we decided to publish a weekly roundup again. This continues the same innovative pace of the previous week as we are getting closer to AWS re:Invent 2023.

Our News Blog team is also finalizing new blog posts for re:Invent to introduce awesome launches with service teams for your reading pleasure. Jeff Barr shared The Road to AWS re:Invent 2023 to explain our blogging journey and process. Please stay tuned in the next week!

Last week’s launches
Here are some of the launches that caught my attention last week:

Amazon EC2 DL2q instances – New DL2q instances are powered by Qualcomm AI 100 Standard accelerators and are the first to feature Qualcomm’s AI technology in the public cloud. With eight Qualcomm AI 100 Standard accelerators and 128 GiB of total accelerator memory, you can run popular generative artificial intelligence (AI) applications and extend to edge devices across smartphones, autonomous driving, personal compute, and extended reality headsets to develop and validate these AI workloads before deploying.

PartyRock for Amazon Bedrock – We introduced PartyRock, a fun and intuitive hands-on, generative AI app-building playground powered by Amazon Bedrock. You can experiment, learn all about prompt engineering, build mini-apps, and share them with your friends—all without writing any code or creating an AWS account.

You also can now access the Meta Llama 2 Chat 13B foundation model and Cohere Command Light, Embed English, and multilingual models for Amazon Bedrock.

AWS Amplify celebrates its sixth birthday – We announced six new launches; a new documentation site, support for Next.js 14 with our hosting and JavaScript library, added custom token providers and an automatic React Native social sign-in update to Amplify Auth, new ChangePassword and DeleteUser account settings components, and updated all Amplify UI packages to use new Amplify JavaScript v6. You can also use wildcard subdomains when using a custom domain with your Amplify application deployed to AWS Amplify Hosting.

Amplify docs site UI

Also check out other News Blog posts about major launches published in the past week:

Other AWS service launches
Here are some other bundled feature launches per AWS service:

Amazon Athena  – You can use a new cost-based optimizer (CBO) to enhance query performance based on table and column statistics, collected by AWS Glue Data Catalog and Athena JDBC 3.x driver, a new alternative that supports almost all authentication plugins. You can also use Amazon EMR Studio to develop and run interactive queries on Amazon Athena.

Amazon CloudWatch – You can use a new CloudWatch metric called EBS Stalled I/O Check to monitor the health of your Amazon EBS volumes, the regular expression for Amazon CloudWatch Logs Live Tail filter pattern syntax to search and match relevant log events, observability of SAP Sybase ASE database in CloudWatch Application Insights, and up to two stats commands in a Log Insights query to perform aggregations on the results.

Amazon CodeCatalyst – You can connect to a Amazon Virtual Private Cloud (Amazon VPC) from CodeCatalyst Workflows, provision infrastructure using Terraform within CodeCatalyst Workflows, access CodeCatalyst with your workforce identities configured in IAM Identity Center, and create teams made up of members of the CodeCatalyst space.

Amazon Connect – You can use a pre-built queue performance dashboard and Contact Lens conversational analytics dashboard to view and compare real-time and historical aggregated queue performance. You can use quick responses for chats, previously written formats such as typing in ‘/#greet’ to insert a personalized response, and scanning attachments to detect malware or other unwanted content.

AWS Glue – AWS Glue for Apache Spark added new six database connectors: Teradata, SAP HANA, Azure SQL, Azure Cosmos DB, Vertica, and MongoDB, as well as the native connectivity to Amazon OpenSearch Service.

AWS Lambda – You can see single pane view of metrics, logs, and traces in the AWS Lambda console and advanced logging controls to natively capture logs in JSON structured format. You can view the SAM template on the Lambda console and export the function’s configuration to AWS Application Composer. AWS Lambda also supports Java 21 and NodeJS 20 versions built on the new Amazon Linux 2023 runtime.

AWS Local Zones in Dallas – You can enable the new Local Zone in Dallas, Texas, us-east-1-dfw-2a, with Amazon EC2 C6i, M6i, R6i, C6gn, and M6g instances and Amazon EBS volume types gp2, gp3, io1, sc1, and st1. You can also access Amazon ECS, Amazon EKS, Application Load Balancer, and AWS Direct Connect in this new Local Zone to support a broad set of workloads at the edge.

Amazon Managed Streaming for Apache Kafka (Amazon MSK) – You can standardize access control to Kafka resources using AWS Identity and Access Management (IAM) and build Kafka clients for Amazon MSK Serverless written in all programming languages. These are open source client helper libraries and code samples for popular languages, including Java, Python, Go, and JavaScript. Also, Amazon MSK now supports an enhanced version of Apache Kafka 3.6.0 that offers generally available Tiered Storage and automatically sends you storage capacity alerts when you are at risk of exhausting your storage.

Amazon OpenSearch Service Ingestion – You can migrate your data from Elasticsearch version 7.x clusters to the latest versions of Amazon OpenSearch Service and use persistent buffering to protect the durability of incoming data.

Amazon RDS –Amazon RDS for MySQL now supports creating active-active clusters using the Group Replication plugin, upgrading MySQL 5.7 snapshots to MySQL 8.0, and Innovation Release version of MySQL 8.1.

Amazon RDS Custom for SQL Server extends point-in-time recovery support for up to 1,000 databases, supports Service Master Key Retention to use transparent data encryption (TDE), table- and column-level encryption, DBMail and linked servers, and use SQL Server Developer edition with the bring your own media (BYOM).

Additionally, Amazon RDS Multi-AZ deployments with two readable standbys now supports minor version upgrades and system maintenance updates with typically less than one second of downtime when using Amazon RDS Proxy.

AWS Partner Central – You can use an improved user experience in AWS Partner Central to build and promote your offerings and the new Investments tab in the Partner Analytics Dashboard to gain actionable insights. You can now link accounts and associated users between Partner Central and AWS Marketplace and use an enhanced co-sell experience with APN Customer Engagements (ACE) manager.

Amazon QuickSight – You can programmatically manage user access and custom permissions support for roles to restrict QuickSight functionality to the QuickSight account for IAM Identity Center and Active Directory using APIs. You can also use shared restricted folders, a Contributor role and support for data source asset types in folders and the Custom Week Start feature, an addition designed to enhance the data analysis experience for customers across diverse industries and social contexts.

AWS Trusted Advisor – You can use new APIs to programmatically access Trusted Advisor best practices checks, recommendations, and prioritized recommendations and 37 new Amazon RDS checks that provide best practices guidance by analyzing DB instance configuration, usage, and performance data.

There’s a lot more launch news that I haven’t covered. See AWS What’s New for more details.

See you virtually in AWS re:Invent
AWS re:Invent 2023Next week we’ll hear the latest from AWS, learn from experts, and connect with the global cloud community in Las Vegas. If you come, check out the agenda, session catalog, and attendee guides before your departure.

If you’re not able to attend re:Invent in person this year, we’re offering the option to livestream our Keynotes and Innovation Talks. With the registration for online pass, you will have access to on-demand keynote, Innovation Talks, and selected breakout sessions after the event.

– Channy

Visualize Amazon DynamoDB insights in Amazon QuickSight using the Amazon Athena DynamoDB connector and AWS Glue

Post Syndicated from Antonio Samaniego Jurado original https://aws.amazon.com/blogs/big-data/visualize-amazon-dynamodb-insights-in-amazon-quicksight-using-the-amazon-athena-dynamodb-connector-and-aws-glue/

Amazon DynamoDB is a fully managed, serverless, key-value NoSQL database designed to run high-performance applications at any scale. DynamoDB offers built-in security, continuous backups, automated multi-Region replication, in-memory caching, and data import and export tools. The scalability and flexible data schema of DynamoDB make it well-suited for a variety of use cases. These include internet-scale web and mobile applications, low-latency metadata stores, high-traffic retail websites, Internet of Things (IoT) and time series data, online gaming, and more.

Data stored in DynamoDB is the basis for valuable business intelligence (BI) insights. To make this data accessible to data analysts and other consumers, you can use Amazon Athena. Athena is a serverless, interactive service that allows you to query data from a variety of sources in heterogeneous formats, with no provisioning effort. Athena accesses data stored in DynamoDB via the open source Amazon Athena DynamoDB connector. Table metadata, such as column names and data types, is stored using the AWS Glue Data Catalog.

Finally, to visualize BI insights, you can use Amazon QuickSight, a cloud-powered business analytics service. QuickSight makes it straightforward for organizations to build visualizations, perform ad hoc analysis, and quickly get business insights from their data, anytime, on any device. Its generative BI capabilities enable you to ask questions about your data using natural language, without having to write SQL queries or learn a BI tool.

This post shows how you can use the Athena DynamoDB connector to easily query data in DynamoDB with SQL and visualize insights in QuickSight.

Solution overview

The following diagram illustrates the solution architecture.

Architecture Diagram

  1. The Athena DynamoDB connector runs in a pre-built, serverless AWS Lambda function. You don’t need to write any code.
  2. AWS Glue provides supplemental metadata from the DynamoDB table. In particular, an AWS Glue crawler is run to infer and store the DynamoDB table format, schema, and associated properties in the Glue Data Catalog.
  3. The Athena editor is used to test the connector and perform analysis via SQL queries.
  4. QuickSight uses the Athena connector to visualize BI insights from DynamoDB.

This walkthrough uses data from the ProductCatalog table, part of the DynamoDB developer guide sample data files.

Prerequisites

Before you get started, you should meet the following prerequisites:

Set up the Athena DynamoDB connector

The Athena DynamoDB connector comprises a pre-built, serverless Lambda function provided by AWS that communicates with DynamoDB so you can query your tables with SQL using Athena. The connector is available in the AWS Serverless Application Repository, and is used to create the Athena data source for later use in data analysis and visualization. To set up the connector, complete the following steps:

  1. On the Athena console, choose Data sources in the navigation pane.
  2. Choose Create data source.
  3. In the search bar, search for and choose Amazon DynamoDB.
  4. Choose Next.
  5. Under Data source details, enter a name. Note that this name should be unique and will be referenced in your SQL statements when you query your Athena data source.
  6. Under Connection details, choose Create Lambda function.

This will take you to the Lambda applications page on the Lambda console. Do not close the Athena data source creation tab; you will return to it in a later step.

  1. Scroll down to Application settings and enter a value for the following parameters (leave the other parameters as default):
    • SpillBucket – Specifies the Amazon Simple Storage Service (Amazon S3) bucket name for storing data that exceeds Lambda function response size limits. To create an S3 bucket, refer to Creating a bucket.
    • AthenaCatalogName – A lowercase name for the Lambda function to be created.Lambda Application Settings
  2. Select the acknowledgement check box and choose Deploy.

Wait for deployment to complete before moving to the next step.

  1. Return to the Athena data source creation tab.
  2. Under Connection details, choose the refresh icon and choose the Lambda function you created.Lambda Connection Details
  3. Choose Next.
  4. Review and choose Create data source.

Provide supplemental metadata via AWS Glue

The Athena connector already comes with a built-in inference capability to discover the schema and table properties of your data source. However, this capability is limited. To accurately discover the metadata of your DynamoDB table and centralize schema management as your data evolves over time, the connector integrates with AWS Glue.

To achieve this, an AWS Glue crawler is run to automatically determine the format, schema, and associated properties of the raw data stored in your DynamoDB table, writing the resulting metadata to a Glue database. Glue databases contain tables, which hold metadata from different data stores, independent from the actual location of the data. The Athena connector then references the Glue table and retrieves the corresponding DynamoDB metadata to enable queries.

Create the AWS Glue database

Complete the following steps to create the Glue database:

  1. On the AWS Glue console, under Data Catalog in the navigation pane, choose Databases.
  2. Choose Add database (you can also edit an existing database if you already have one).
  3. For Name, enter a database name.
  4. For Location, enter the string literal dynamo-db-flag. This keyword indicates that the database contains tables that the connector can use for supplemental metadata.
  5. Choose Create database.

Following security best practices, it is also recommended that you enable encryption at rest for your Data Catalog. For details, refer to Encrypting your Data Catalog.

Create the AWS Glue crawler

Complete the following steps to create and run the Glue crawler:

  1. On the AWS Glue console, under Data Catalog in the navigation pane, choose Crawlers.
  2. Choose Create crawler.
  3. Enter a crawler name and choose Next.
  4. For Data sources, choose Add a data source.
  5. On the Data source drop-down menu, choose DynamoDB. For Table name, enter the name of your DynamoDB table (string literal).
  6. Choose Add a DynamoDB data source.
  7. Choose Next.
  8. For IAM Role, choose Create new IAM role.
  9. Enter a role name and choose Create. This will automatically create an IAM role that trusts AWS Glue and has permissions to access the crawler targets.
  10. Choose Next.
  11. For Target database, choose the database previously created.
  12. Choose Next.
  13. Review and choose Create crawler.
  14. On the newly created crawler page, choose Run crawler.

Crawler runtimes depend on your DynamoDB table size and properties. You can find crawler run details under Crawler runs.

Validate the output metadata

When your crawler run status shows as Completed, follow the below steps to validate the output metadata:

  1. On the AWS Glue console, choose Tables in the navigation pane. Here, you can confirm a new table has been added to the database as a result of the crawler run.
  2. Navigate to the newly created table and take a look at the Schema tab. This tab shows the column names, data types, and other parameters inferred from your DynamoDB table.
  3. If needed, edit the schema by choosing Edit schema.Glue Table Details
  4. Choose Advanced properties.
  5. Under Table properties, verify the crawler automatically created and set the classification key to dynamodb. This indicates to the Athena connector that the table can be used for supplemental metadata.
  6. Optionally, add the following properties to correctly catalog and reference DynamoDB data in AWS Glue and Athena queries. This is due to capital letters not being permitted in AWS Glue table and column names, but being permitted in DynamoDB table and attribute names.
    1. If your DynamoDB table name contains any capital letters, choose Actions and Edit Table and add an extra table property as follows:
      • Key: sourceTable
      • Value: YourDynamoDBTableName
    2. If your DynamoDB table has attributes that contain any capital letters, add an extra table property as follows:
      • Key: columnMapping
      • Value: yourcolumn1=YourColumn1, yourcolumn2=YourColumn2, …

Test the connector with the Athena SQL editor

After the Athena DynamoDB connector is deployed and the AWS Glue table is populated with supplemental metadata, the DynamoDB table is ready for analysis. The example in this post uses the Athena editor to make SQL queries to the ProductCatalog table. For further options to interact with Athena, see Accessing Athena.

Complete the following steps to test the connector:

  1. Open the Athena query editor.
  2. If this is your first time visiting the Athena console in your current AWS Region, complete the following steps. This is a prerequisite before you can run Athena queries. See Getting Started for more details.
    1. Choose Query editor in the navigation pane to open the editor.
    2. Navigate to Settings and choose Manage to set up a query result location in Amazon S3.
  3. Under Data, select the data source and database you created (you may need to choose the refresh icon for them to sync up with Athena).
  4. Tables belonging to the selected database appear under Tables. You can choose a table name for Athena to show the table column list and data types.
  5. Test the connector by pulling data from your table via a SELECT statement. When you run Athena queries, you can reference Athena data sources, databases, and tables as <datasource_name>.<database>.<table_name>. Retrieved records are shown under Results.

For increased security, refer to Encrypting Athena query results stored in Amazon S3 to encrypt query results at rest.

Athena Query Results

For this post, we run a SELECT statement to validate the process. You can refer to the SQL reference for Athena to build more complex queries and analyses.

Visualize in QuickSight

QuickSight allows for building modern interactive dashboards, paginated reports, embedded analytics, and natural language queries through a unified BI solution. In this step, we use QuickSight to generate visual insights from the DynamoDB table by connecting to the Athena data source previously created.

Allow QuickSight to access to resources

Complete the following steps to grant QuickSight access to resources:

  1. On the QuickSight console, choose the profile icon and choose Manage QuickSight.
  2. In the navigation pane, choose Security & Permissions.
  3. Under QuickSight access to AWS services, choose Manage.
  4. QuickSight may ask you to switch to the Region in which users and groups in your account are managed. To change the current Region, navigate to the profile icon on the QuickSight console and choose the Region you want to switch to.
  5. For IAM Role, choose Use QuickSight-managed role (default).

Subsequent instructions assume that the default QuickSight-managed role is being used. If this is not the case, make sure to update the existing role to the same effect.

  1. Under Allow access and autodiscovery for these resources, select IAM and Amazon S3.
  2. For Amazon S3, choose Select S3 buckets.
  3. Choose the spill bucket you specified in earlier when deploying the Lambda function for the connector and the bucket you specified as the Athena query result location in Amazon S3.
  4. For both buckets, select Write permission for Athena Workgroup.
  5. Choose Amazon Athena.
  6. In the pop-up window, choose Next.
  7. Choose Lambda and choose the Amazon Resource Name (ARN) of the Lambda function previously used for the Athena data source connector.
  8. Choose Finish.
  9. Choose Save.

Create the Athena dataset

To create the Athena dataset, complete the following steps:

  1. On the QuickSight console, choose the user profile and switch to the Region you deployed the Athena data source to.
  2. Return to the QuickSight home page.
  3. In the navigation pane, choose Datasets.
  4. Choose New dataset.
  5. For Create a Dataset, select Athena.
  6. For Data source name, enter a name and choose Validate connection.
  7. When the connection shows as Validated, choose Create data source.
  8. Under Catalog, Database, and Tables, select the Athena data source, AWS Glue database, and AWS Glue table previously created.
  9. Choose Select.
  10. On the Finish dataset creation page, select Import to SPICE for quicker analytics.
  11. Choose Visualize.

For additional information on QuickSight query modes, see Importing data into SPICE and Using SQL to customize data.

Build QuickSight visualizations

Once the DynamoDB data is available in QuickSight via the Athena DynamoDB connector, it is ready to be visualized. The QuickSight analysis in the below example shows a vertical stacked bar chart with the average price per product category for the ProductCatalog sample dataset. In addition, it shows a donut chart with the proportion of products by product category, and a tree map containing the count of bicycles per bicycle type.

If you use data imported to SPICE in a QuickSight analysis, the dataset will only be available after the import is complete. For further details, see Using SPICE data in an analysis.

Quicksight Analysis

For comprehensive information on how to create and share visualizations in QuickSight, refer to Visualizing data in Amazon QuickSight and Sharing and subscribing to data in Amazon QuickSight.

Clean up

To avoid incurring continued AWS usage charges, make sure you delete all resources created as part of this walkthrough.

  • Delete the Athena data source:
    1. On the Athena console, switch to the Region you deployed your resources in.
    2. Choose Data sources in the navigation pane.
    3. Select the data source you created and on the Actions menu, choose Delete.
  • Delete the Lambda application:
    1. On the AWS CloudFormation console, switch to the Region you deployed your resources in.
    2. Choose Stacks in the navigation pane.
    3. Select serverlessrepo-AthenaDynamoDBConnector and choose Delete.
  • Delete the AWS Glue resources:
    1. On the AWS Glue console, switch to the Region you deployed your resources in.
    2. Choose Databases in the navigation pane.
    3. Select the database you created and choose Delete.
    4. Choose Crawlers in the navigation pane.
    5. Select the crawler you created and on the Action menu, choose Delete crawler.
  • Delete the QuickSight resources:
    1. On the QuickSight console, switch to the Region you deployed your resources in.
    2. Delete the analysis created for this walkthrough.
    3. Delete the Athena dataset created for this walkthrough.
    4. If you no longer need the Athena data source to create other datasets, delete the data source.

Summary

This post demonstrated how you can use the Athena DynamoDB connector to query data in DynamoDB with SQL and build visualizations in QuickSight.

Learn more about the Athena DynamoDB connector in the Amazon Athena User Guide. Discover more available data source connectors to query and visualize a variety of data sources without setting up or managing any infrastructure while only paying for the queries you run.

For advanced QuickSight capabilities powered by AI, see Gaining insights with machine learning (ML) in Amazon QuickSight and Answering business questions with Amazon QuickSight Q.


About the Authors

Antonio Samaniego Jurado is a Solutions Architect at Amazon Web Services. With a strong passion for modern technology, Antonio helps customers build state-of-the-art applications on AWS. A creator at heart, he loves community-driven learning and sharing of best practices across the AWS service portfolio to make the best of customers cloud journey.

Pascal Vogel is a Solutions Architect at Amazon Web Services. Pascal helps startups and enterprises build cloud-native solutions. As a cloud enthusiast, Pascal loves learning new technologies and connecting with like-minded customers who want to make a difference in their cloud journey.

Use generative AI with Amazon EMR, Amazon Bedrock, and English SDK for Apache Spark to unlock insights

Post Syndicated from Saurabh Bhutyani original https://aws.amazon.com/blogs/big-data/use-generative-ai-with-amazon-emr-amazon-bedrock-and-english-sdk-for-apache-spark-to-unlock-insights/

In this era of big data, organizations worldwide are constantly searching for innovative ways to extract value and insights from their vast datasets. Apache Spark offers the scalability and speed needed to process large amounts of data efficiently.

Amazon EMR is the industry-leading cloud big data solution for petabyte-scale data processing, interactive analytics, and machine learning (ML) using open source frameworks such as Apache Spark, Apache Hive, and Presto. Amazon EMR is the best place to run Apache Spark. You can quickly and effortlessly create managed Spark clusters from the AWS Management Console, AWS Command Line Interface (AWS CLI), or Amazon EMR API. You can also use additional Amazon EMR features, including fast Amazon Simple Storage Service (Amazon S3) connectivity using the Amazon EMR File System (EMRFS), integration with the Amazon EC2 Spot market and the AWS Glue Data Catalog, and EMR Managed Scaling to add or remove instances from your cluster. Amazon EMR Studio is an integrated development environment (IDE) that makes it straightforward for data scientists and data engineers to develop, visualize, and debug data engineering and data science applications written in R, Python, Scala, and PySpark. EMR Studio provides fully managed Jupyter notebooks, and tools like Spark UI and YARN Timeline Service to simplify debugging.

To unlock the potential hidden within the data troves, it’s essential to go beyond traditional analytics. Enter generative AI, a cutting-edge technology that combines ML with creativity to generate human-like text, art, and even code. Amazon Bedrock is the most straightforward way to build and scale generative AI applications with foundation models (FMs). Amazon Bedrock is a fully managed service that makes FMs from Amazon and leading AI companies available through an API, so you can quickly experiment with a variety of FMs in the playground, and use a single API for inference regardless of the models you choose, giving you the flexibility to use FMs from different providers and keep up to date with the latest model versions with minimal code changes.

In this post, we explore how you can supercharge your data analytics with generative AI using Amazon EMR, Amazon Bedrock, and the pyspark-ai library. The pyspark-ai library is an English SDK for Apache Spark. It takes instructions in English language and compiles them into PySpark objects like DataFrames. This makes it straightforward to work with Spark, allowing you to focus on extracting value from your data.

Solution overview

The following diagram illustrates the architecture for using generative AI with Amazon EMR and Amazon Bedrock.

Solution Overview

EMR Studio is a web-based IDE for fully managed Jupyter notebooks that run on EMR clusters. We interact with EMR Studio Workspaces connected to a running EMR cluster and run the notebook provided as part of this post. We use the New York City Taxi data to garner insights into various taxi rides taken by users. We ask the questions in natural language on top of the data loaded in Spark DataFrame. The pyspark-ai library then uses the Amazon Titan Text FM from Amazon Bedrock to create a SQL query based on the natural language question. The pyspark-ai library takes the SQL query, runs it using Spark SQL, and provides results back to the user.

In this solution, you can create and configure the required resources in your AWS account with an AWS CloudFormation template. The template creates the AWS Glue database and tables, S3 bucket, VPC, and other AWS Identity and Access Management (IAM) resources that are used in the solution.

The template is designed to demonstrate how to use EMR Studio with the pyspark-ai package and Amazon Bedrock, and is not intended for production use without modification. Additionally, the template uses the us-east-1 Region and may not work in other Regions without modification. The template creates resources that incur costs while they are in use. Follow the cleanup steps at the end of this post to delete the resources and avoid unnecessary charges.

Prerequisites

Before you launch the CloudFormation stack, ensure you have the following:

  • An AWS account that provides access to AWS services
  • An IAM user with an access key and secret key to configure the AWS CLI, and permissions to create an IAM role, IAM policies, and stacks in AWS CloudFormation
  • The Titan Text G1 – Express model is currently in preview, so you need to have preview access to use it as part of this post

Create resources with AWS CloudFormation

The CloudFormation creates the following AWS resources:

  • A VPC stack with private and public subnets to use with EMR Studio, route tables, and NAT gateway.
  • An EMR cluster with Python 3.9 installed. We are using a bootstrap action to install Python 3.9 and other relevant packages like pyspark-ai and Amazon Bedrock dependencies. (For more information, refer to the bootstrap script.)
  • An S3 bucket for the EMR Studio Workspace and notebook storage.
  • IAM roles and policies for EMR Studio setup, Amazon Bedrock access, and running notebooks

To get started, complete the following steps:

  1. Choose Launch Stack:
    Launch Button
  2. Select I acknowledge that this template may create IAM resources.

The CloudFormation stack takes approximately 20–30 minutes to complete. You can monitor its progress on the AWS CloudFormation console. When its status reads CREATE_COMPLETE, your AWS account will have the resources necessary to implement this solution.

Create EMR Studio

Now you can create an EMR Studio and Workspace to work with the notebook code. Complete the following steps:

  1. On the EMR Studio console, choose Create Studio.
  2. Enter the Studio Name as GenAI-EMR-Studio and provide a description.
  3. In the Networking and security section, specify the following:
    • For VPC, choose the VPC you created as part of the CloudFormation stack that you deployed. Get the VPC ID using the CloudFormation outputs for the VPCID key.
    • For Subnets, choose all four subnets.
    • For Security and access, select Custom security group.
    • For Cluster/endpoint security group, choose EMRSparkAI-Cluster-Endpoint-SG.
    • For Workspace security group, choose EMRSparkAI-Workspace-SG.VPC Networking and Security
  4. In the Studio service role section, specify the following:
    • For Authentication, select AWS Identity and Access Management (IAM).
    • For AWS IAM service role, choose EMRSparkAI-StudioServiceRole.
  5. In the Workspace storage section, browse and choose the S3 bucket for storage starting with emr-sparkai-<account-id>.
  6. Choose Create Studio.Create Studio
  7. When the EMR Studio is created, choose the link under Studio Access URL to access the Studio.
  8. When you’re in the Studio, choose Create workspace.
  9. Add emr-genai as the name for the Workspace and choose Create workspace.
  10. When the Workspace is created, choose its name to launch the Workspace (make sure you’ve disabled any pop-up blockers).

Big data analytics using Apache Spark with Amazon EMR and generative AI

Now that we have completed the required setup, we can start performing big data analytics using Apache Spark with Amazon EMR and generative AI.

As a first step, we load a notebook that has the required code and examples to work with the use case. We use NY Taxi dataset, which contains details about taxi rides.

  1. Download the notebook file NYTaxi.ipynb and upload it to your Workspace by choosing the upload icon.
  2. After the notebook is imported, open the notebook and choose PySpark as the kernel.

PySpark AI by default uses OpenAI’s ChatGPT4.0 as the LLM model, but you can also plug in models from Amazon Bedrock, Amazon SageMaker JumpStart, and other third-party models. For this post, we show how to integrate the Amazon Bedrock Titan model for SQL query generation and run it with Apache Spark in Amazon EMR.

  1. To get started with the notebook, you need to associate the Workspace to a compute layer. To do so, choose the Compute icon in the navigation pane and choose the EMR cluster created by the CloudFormation stack.
  2. Configure the Python parameters to use the updated Python 3.9 package with Amazon EMR:
    %%configure -f
    {
    "conf": {
    "spark.executorEnv.PYSPARK_PYTHON": "/usr/local/python3.9.18/bin/python3.9",
    "spark.yarn.appMasterEnv.PYSPARK_PYTHON": "/usr/local/python3.9.18/bin/python3.9"
    }
    }

  3. Import the necessary libraries:
    from pyspark_ai import SparkAI
    from pyspark.sql import SparkSession
    from langchain.chat_models import ChatOpenAI
    from langchain.llms.bedrock import Bedrock
    import boto3
    import os

  4. After the libraries are imported, you can define the LLM model from Amazon Bedrock. In this case, we use amazon.titan-text-express-v1. You need to enter the Region and Amazon Bedrock endpoint URL based on your preview access for the Titan Text G1 – Express model.
    boto3_bedrock = boto3.client('bedrock-runtime', '<region>', endpoint_url='<bedrock endpoint url>')
    llm = Bedrock(
    model_id="amazon.titan-text-express-v1",
    client=boto3_bedrock)

  5. Connect Spark AI to the Amazon Bedrock LLM model for SQL query generation based on questions in natural language:
    #Connecting Spark AI to the Bedrock Titan LLM
    spark_ai = SparkAI(llm = llm, verbose=False)
    spark_ai.activate()

Here, we have initialized Spark AI with verbose=False; you can also set verbose=True to see more details.

Now you can read the NYC Taxi data in a Spark DataFrame and use the power of generative AI in Spark.

  1. For example, you can ask the count of the number of records in the dataset:
    taxi_records.ai.transform("count the number of records in this dataset").show()

We get the following response:

> Entering new AgentExecutor chain...
Thought: I need to count the number of records in the table.
Action: query_validation
Action Input: SELECT count(*) FROM spark_ai_temp_view_ee3325
Observation: OK
Thought: I now know the final answer.
Final Answer: SELECT count(*) FROM spark_ai_temp_view_ee3325
> Finished chain.
+----------+
| count(1)|
+----------+
|2870781820|
+----------+

Spark AI internally uses LangChain and SQL chain, which hide the complexity from end-users working with queries in Spark.

The notebook has a few more example scenarios to explore the power of generative AI with Apache Spark and Amazon EMR.

Clean up

Empty the contents of the S3 bucket emr-sparkai-<account-id>, delete the EMR Studio Workspace created as part of this post, and then delete the CloudFormation stack that you deployed.

Conclusion

This post showed how you can supercharge your big data analytics with the help of Apache Spark with Amazon EMR and Amazon Bedrock. The PySpark AI package allows you to derive meaningful insights from your data. It helps reduce development and analysis time, reducing time to write manual queries and allowing you to focus on your business use case.


About the Authors

Saurabh Bhutyani is a Principal Analytics Specialist Solutions Architect at AWS. He is passionate about new technologies. He joined AWS in 2019 and works with customers to provide architectural guidance for running generative AI use cases, scalable analytics solutions and data mesh architectures using AWS services like Amazon Bedrock, Amazon SageMaker, Amazon EMR, Amazon Athena, AWS Glue, AWS Lake Formation, and Amazon DataZone.

Harsh Vardhan is an AWS Senior Solutions Architect, specializing in analytics. He has over 8 years of experience working in the field of big data and data science. He is passionate about helping customers adopt best practices and discover insights from their data.

Clean up your Excel and CSV files without writing code using AWS Glue DataBrew

Post Syndicated from Ismail Makhlouf original https://aws.amazon.com/blogs/big-data/clean-up-your-excel-and-csv-files-without-writing-code-using-aws-glue-databrew/

Managing data within an organization is complex. Handling data from outside the organization adds even more complexity. As the organization receives data from multiple external vendors, it often arrives in different formats, typically Excel or CSV files, with each vendor using their own unique data layout and structure. In this blog post, we’ll explore a solution that streamlines this process by leveraging the capabilities of AWS Glue DataBrew.

DataBrew is an excellent tool for data quality and preprocessing. You can use its built-in transformations, recipes, as well as integrations with the AWS Glue Data Catalog and Amazon Simple Storage Service (Amazon S3) to preprocess the data in your landing zone, clean it up, and send it downstream for analytical processing.

In this post, we demonstrate the following:

  • Extracting non-transactional metadata from the top rows of a file and merging it with transactional data
  • Combining multi-line rows into single-line rows
  • Extracting unique identifiers from within strings or text

Solution overview

For this use case, imagine you’re a data analyst working at your organization. The sales leadership have requested a consolidated view of the net sales they are making from each of the organization’s suppliers. Unfortunately, this information is not available in a database. The sales data comes from each supplier in layouts like the following example.

However, with hundreds of resellers, manually extracting the information at the top is not feasible. Your goal is to clean up and flatten the data into the following output layout.

image2

To achieve this, you can use pre-built transformations in DataBrew to quickly get the data in the layout you want.

Prerequisites

For this walkthrough, you should have the following prerequisites:

Connect to the dataset

The first thing we need to do is upload the input dataset to Amazon S3. Create an S3 bucket for the project and create a folder to upload the raw input data. The output data will be stored in another folder in a later step.

Next, we need to connect DataBrew to our CSV file. We create what we call a dataset, which
is an artifact that points to whatever data source we will be using. Navigate to “Datasets” on
the left hand menu.

Ensure the Column header values field is set to Add default header. The input CSV has an irregular format, so the first row will not have the needed column values.

Create a project

To create a new project, complete the following steps:

  1. On the DataBrew console, choose Projects in the navigation pane.
  2. Choose Create project.
  3. For Project name, enter FoodMartSales-AllUpProject.
  4. For Attached recipe, choose Create new recipe.
  5. For Recipe name, enter FoodMartSales-AllUpProject-recipe.
  6. For Select a dataset, select My datasets.
  7. Select the FoodMartSales-AllUp dataset.
  8. Under Permissions, for Role name, choose the IAM role you created as a prerequisite or create a new role.
  9. Choose Create project.

After the project is opened, an interactive session is created where you can author transformations on a sample of the data.

Extract non-transactional metadata from within the contents of the file and merge it with transactional data

In this section, we consider data that has metadata on the first few rows of the file, followed by transactional data. We walk through how to extract data relevant to the whole file from the top of the document and combine it with the transactional data into one flat table.

Extract metadata from the header and remove invalid rows

Complete the following steps to extract metadata from the header:

  1. Choose Conditions and then choose IF.
  2. For Matching conditions, choose Match all conditions.
  3. For Source, choose Value of and Column_1.
  4. For Logical condition, choose Is exactly.
  5. For Enter a value, choose Enter custom value and enter RESELLER NAME.
  6. For Flag result value as, choose Custom value.
  7. For Value if true, choose Select source column and set Value of to Column_2.
  8. For Value if false, choose Enter custom value and enter INVALID.
  9. Choose Apply.

Your dataset should now look like the following screenshot, with the Reseller Name value extracted to a column by itself.

Next, you remove invalid rows and fill the rows with the Reseller Name value.

  1. Choose Clean and then choose Custom values.
  2. For Source column, choose ResellerName.
  3. For Specify values to remove, choose Custom value.
  4. For Values to remove, choose Invalid.
  5. For Apply transform to, choose All rows.
  6. Choose Apply.
  7. Choose Missing and then choose Fill with most frequent value.
  8. For Source column, choose FirstTransactionDate.
  9. For Missing value action, choose Fill with most frequent value.
  10. For Apply transform to, choose All rows.
  11. Choose Apply.

Your dataset should now look like the following screenshot, with the Reseller Name value extracted to a column by itself.

Repeat the same steps in this section for the rest of the metadata, including Reseller Email Address, Reseller ID, and First Transaction Date.

Promote column headers and clean up data

To promote column headers, complete the following steps:

  1. Reorder the columns to put the metadata columns to the left of the dataset by choosing Column, Move column, and Start of the table.
  2. Rename the columns with the appropriate names.

Now you can clean up some columns and rows.

  1. Delete unnecessary columns, such as Column_7.

You can also delete invalid rows by filtering out records that don’t have a transaction date value.

  1. Choose the ABC icon on the menu of the Transaction_Date column and choose date.

  2. For Handle invalid values, select Delete rows, then choose Apply.

The dataset should now have the metadata extracted and the column headers promoted.

Combine multi-line rows into single-line rows

The next issue to address is transactions pertaining to the same row that are split across multiple lines. In the following steps, we extract the needed data from the rows and merge it into single-line transactions. For this example specifically, the Reseller Margin data is split across two lines.


Complete the following steps to get the Reseller Margin value on the same line as the corresponding transaction. First, we identify the Reseller Margin rows and store them in a temporary column.

  1. Choose Conditions and then choose IF.
  2. For Matching conditions, choose Match all conditions.
  3. For Source, choose Value of and Transaction_ID.
  4. For Logical condition, choose Contains.
  5. For Enter a value, choose Enter custom value and enter Reseller Margin.
  6. For Flag result value as, choose Custom value.
  7. For Value if true, choose Select source column set Value of to TransactionAmount.
  8. For Value if false, choose Enter custom value and enter Invalid.
  9. For Destination column, choose ResellerMargin_Temp.
  10. Choose Apply.

Next, you shift the Reseller Margin value up one row.

  1. Choose Functions and then choose NEXT.
  2. For Source column, choose ResellerMargin_Temp.
  3. For Number of rows, enter 1.
  4. For Destination column, choose ResellerMargin.
  5. For Apply transform to, choose All rows.
  6. Choose Apply.

Next, delete the invalid rows.

  1. Choose Missing and then choose Remove missing rows.
  2. For Source column, choose TransactionDate.
  3. For Missing value action, choose Delete rows with missing values.
  4. For Apply transform to, choose All rows.
  5. Choose Apply.

Your dataset should now look like the following screenshot, with the Reseller Margin value extracted to a column by itself.

With the data structured properly, we can move on to mining the cleaned data.

Extract unique identifiers from within strings and text

Many types of data contain important information stored as unstructured text in a cell. In this section, we look at how to extract this data. Within the sample dataset, the BankTransferText column has valuable information around our resellers’ registered bank account numbers as well as the currency of the transaction, namely IBAN, SWIFT Code, and Currency.

Complete the following steps to extract IBAN, SWIFT code, and Currency into separate columns. First, you extract the IBAN number from the text using a regular expression (regex).

  1. Choose Extract and then choose Custom value or pattern.
  2. For Create column options, choose Extract values.
  3. For Source column, choose BankTransferText.
  4. For Extract options, choose Custom value or pattern.
  5. For Values to extract, enter [a-zA-Z][a-zA-Z][0-9]{2}[A-Z0-9]{1,30}.
  6. For Destination column, choose IBAN.
  7. For Apply transform to, choose All rows.
  8. Choose Apply.
  9. Extract the SWIFT code from the text using a regex following the same steps used to extract the IBAN number, but using the following regex instead: (?!^)(SWIFT Code: )([A-Z]{2}[A-Z0-9]+).

Next, remove the SWIFT Code: label from the extracted text.

  1. Choose Remove and then choose Custom values.
  2. For Source column, choose SWIFT Code.
  3. For Specify values to remove, choose Custom value.
  4. For Apply transform to, choose All rows.
  5. Extract the currency from the text using a regex following the same steps used to extract the IBAN number, but using the following regex instead: (?!^)(Currency: )([A-Z]{3}).
  6. Remove the Currency: label from the extracted text following the same steps used to remove the SWIFT Code: label.

You can clean up by deleting any unnecessary columns.

  1. Choose Column and then choose Delete.
  2. For Source columns, choose BankTransferText.
  3. Choose Apply.
  4. Repeat for any remaining columns.

Your dataset should now look like the following screenshot, with IBAN, SWIFT Code, and Currency extracted to separate columns.

Write the transformed data to Amazon S3

With all the steps captured in the recipe, the last step is to write the transformed data to Amazon S3.

  1. On the DataBrew console, choose Run job.
  1. For Job name, enter FoodMartSalesToDataLake.
  2. For Output to, choose Amazon S3.
  3. For File type, choose CSV.
  4. For Delimiter, choose Comma (,).
  5. For Compression, choose None.
  6. For S3 bucket owners’ account, select Current AWS account.
  7. For S3 location, enter s3://{name of S3 bucket}/clean/.
  8. For Role name, choose the IAM role created as a prerequisite or create a new role.
  9. Choose Create and run job.
  10. Go to the Jobs tab and wait for the job to complete.
  11. Navigate to the job output folder on the Amazon S3 console.
  12. Download the CSV file and view the transformed output.

Your dataset should look similar to the following screenshot.

Clean up

To optimize cost, make sure to clean up the resources deployed for this project by completing the following steps:

  1. Delete every DataBrew project along with their linked recipes.
  2. Delete all the DataBrew datasets.
  3. Delete the contents in your S3 bucket.
  4. Delete the S3 bucket.

Conclusion

The reality of exchanging data with suppliers is that we can’t always control the shape of the input data. With DataBrew, we can use a list of pre-built transformations and repeatable steps to transform incoming data into a desired layout and extract relevant data and insights from Excel or CSV files. Start using DataBrew today and transform 3 rd party files into structured datasets ready for consumption by your business.


About the Author

Ismail Makhlouf is a Senior Specialist Solutions Architect for Data Analytics at AWS. Ismail focuses on architecting solutions for organizations across their end-to-end data analytics estate, including batch and real-time streaming, big data, data warehousing, and data lake workloads. He primarily works with direct-to-consumer platform companies in the ecommerce, FinTech, PropTech, and HealthTech space to achieve their business objectives with well-architected data platforms.

Converting Apache Kafka events from Avro to JSON using EventBridge Pipes

Post Syndicated from Pascal Vogel original https://aws.amazon.com/blogs/compute/converting-apache-kafka-events-from-avro-to-json-using-eventbridge-pipes/

This post is written by Pascal Vogel, Solutions Architect, and Philipp Klose, Global Solutions Architect.

Event streaming with Apache Kafka has become an important element of modern data-oriented and event-driven architectures (EDAs), unlocking use cases such as real-time analytics of user behavior, anomaly and fraud detection, and Internet of Things event processing. Stream producers and consumers in Kafka often use schema registries to ensure that all components follow agreed-upon event structures when sending (serializing) and processing (deserializing) events to avoid application bugs and crashes.

A common schema format in Kafka is Apache Avro, which supports rich data structures in a compact binary format. To integrate Kafka with other AWS and third-party services more easily, AWS offers Amazon EventBridge Pipes, a serverless point-to-point integration service. However, many downstream services expect JSON-encoded events, requiring custom, and repetitive schema validation and conversion logic from Avro to JSON in each downstream service.

This blog post shows how to reliably consume, validate, convert, and send Avro events from Kafka to AWS and third-party services using EventBridge Pipes, allowing you to reduce custom deserialization logic in downstream services. You can also use EventBridge event buses as targets in Pipes to filter and distribute events from Pipes to multiple targets, including cross-account and cross-Region delivery.

This blog describes two scenarios:

  1. Using Amazon Managed Streaming for Apache Kafka (Amazon MSK) and AWS Glue Schema Registry.
  2. Using Confluent Cloud and the Confluent Schema Registry.

See the associated GitHub repositories for Glue Schema Registry or Confluent Schema Registry for full source code and detailed deployment instructions.

Kafka event streaming and schema validation on AWS

To build event streaming applications with Kafka on AWS, you can use Amazon MSK, offerings such as Confluent Cloud, or self-hosted Kafka on Amazon Elastic Compute Cloud (Amazon EC2) instances.

To avoid common issues in event streaming and event-driven architectures, such as data inconsistencies and incompatibilities, it is a recommended practice to define and share event schemas between event producers and consumers. In Kafka, schema registries are used to manage, evolve, and enforce schemas for event producers and consumers. The AWS Glue Schema Registry provides a central location to discover, manage, and evolve schemas. In the case of Confluent Cloud, the Confluent Schema Registry serves the same role. Both the Glue Schema Registry and the Confluent Schema Registry support common schema formats such as Avro, Protobuf, and JSON.

To integrate Kafka with AWS services, third-party services, and your own applications, you can use EventBridge Pipes. EventBridge Pipes helps you create point-to-point integrations between event sources and targets with optional filtering, transformation, and enrichment. EventBridge Pipes reduces the amount of integration code that you have to write and maintain when building EDAs.

Many AWS and third-party services expect JSON-encoded payloads (events) as input, meaning they cannot directly consume Avro or Protobuf payloads. To replace repetitive Avro-to-JSON validation and conversion logic in each consumer, you can use the EventBridge Pipes enrichment step. This solution uses an AWS Lambda function in the enrichment step to deserialize and validate Kafka events with a schema registry, including error handling with dead-letter queues, and convert events to JSON before passing them to downstream services.

Solution overview

Architecture overview of the solution

The solution presented in this blog post consists of the following key elements:

  1. The source of the pipe is a Kafka cluster deployed using MSK or Confluent Cloud. EventBridge Pipes reads events from the Kafka stream in batches and sends them to the enrichment function (see here for an example event).
  2. The enrichment step (Lambda function) deserializes and validates the events against the configured schema registry (Glue or Confluent), converts events from Avro to JSON with integrated error handling, and returns them to the pipe.
  3. The target of this example solution is an EventBridge custom event bus that is invoked by EventBridge Pipes with JSON-encoded events returned by the enrichment Lambda function. EventBridge Pipes supports a variety of other targets, including Lambda, AWS Step Functions, Amazon API Gateway, API destinations, and more, enabling you to build EDAs without writing integration code.
  4. In this sample solution, the event bus sends all events to Amazon CloudWatch Logs via an EventBridge rule. You can extend the example to invoke additional EventBridge targets.

Optionally, you can add OpenAPI 3 or JSONSchema Draft 4 schemas for your events in the EventBridge schema registry by either manually generating it from the Avro schema or using EventBridge schema discovery. This allows you to download code bindings for the JSON-converted events for various programming languages, such as JavaScript, Python, and Java, to correctly use them in your EventBridge targets.

The remainder of this blog post describes this solution for the Glue and Confluent schema registries with code examples.

EventBridge Pipes with the Glue Schema Registry

This section describes how to implement event schema validation and conversion from Avro to JSON using EventBridge Pipes and the Glue Schema Registry. You can find the source code and detailed deployment instructions on GitHub.

Prerequisites

You need an Amazon MSK serverless cluster running and the Glue Schema registry configured. This example includes a Avro schema and a Glue Schema Registry. See the following AWS blog post for an introduction to schema validation with the Glue Schema Registry: Validate, evolve, and control schemas in Amazon MSK and Amazon Kinesis Data Streams with AWS Glue Schema Registry.

EventBridge Pipes configuration

Use the AWS Cloud Development Kit (AWS CDK) template provided in the GitHub repository to deploy:

  1. An EventBridge pipe that connects to your existing Amazon MSK Serverless Kafka topic as the source via AWS Identity and Access Management (IAM) authentication.
  2. EventBridge Pipes reads events from your Kafka topic using the Amazon MSK source type.
  3. An enrichment Lambda function in Java to perform event deserialization, validation, and conversion from Avro to JSON.
  4. An Amazon Simple Queue Service (Amazon SQS) dead letter queue to hold events for which deserialization failed.
  5. An EventBridge custom event bus as the pipe target. An EventBridge rule sends all incoming events into a CloudWatch Logs log group.

For MSK-based sources, EventBridge supports configuration parameters, such as batch window, batch size, and starting position, which you can set using the parameters of the CfnPipe class in the example CDK stack.

The example EventBridge pipe consumes events from Kafka in batches of 10 because it is targeting an EventBridge event bus, which has a max batch size of 10. See batching and concurrency in the EventBridge Pipes User Guide to choose an optimal configuration for other targets.

EventBridge Pipes with the Confluent Schema Registry

This section describes how to implement event schema validation and conversion from Avro to JSON using EventBridge Pipes and the Confluent Schema Registry. You can find the source code and detailed deployment instructions on GitHub.

Prerequisites

To set up this solution, you need a Kafka stream running on Confluent Cloud as well as the Confluent Schema Registry set up. See the corresponding Schema Registry tutorial for Confluent Cloud to set up a schema registry for your Confluent Kafka stream.

To connect to your Confluent Cloud Kafka cluster, you need an API key for Confluent Cloud and Confluent Schema Registry. AWS Secrets Manager is used to securely store your Confluent secrets.

EventBridge Pipes configuration

Use the AWS CDK template provided in the GitHub repository to deploy:

  1. An EventBridge pipe that connects to your existing Confluent Kafka topic as the source via an API secret stored in Secrets Manager.
  2. EventBridge Pipes reads events from your Confluent Kafka topic using the self-managed Apache Kafka stream source type, which includes all non-MSK Kafka clusters.
  3. An enrichment Lambda function in Python to perform event deserialization, validation, and conversion from Avro to JSON.
  4. An SQS dead letter queue to hold events for which deserialization failed.
  5. An EventBridge custom event bus as the pipe target. An EventBridge rule writes all incoming events into a CloudWatch Logs log group.

For self-managed Kafka sources, EventBridge supports configuration parameters, such as batch window, batch size, and starting position, which you can set using the parameters of the CfnPipe class in the example CDK stack.

The example EventBridge pipe consumes events from Kafka in batches of 10 because it is targeting an EventBridge event bus, which has a max batch size of 10. See batching and concurrency in the EventBridge Pipes User Guide to choose an optimal configuration for other targets.

Enrichment Lambda functions

Both of the solutions described previously include an enrichment Lambda function for schema validation and conversion from Avro to JSON.

The Java Lambda function integrates with the Glue Schema Registry using the AWS Glue Schema Registry Library. The Python Lambda function integrates with the Confluent Schema Registry using the confluent-kafka library and uses Powertools for AWS Lambda (Python) to implement Serverless best practices such as logging and tracing.

The enrichment Lambda functions perform the following tasks:

  1. In the events polled from the Kafka stream by the EventBridge pipe, the key and value of the event are base64 encoded. Therefore, for each event in the batch passed to the function, the key and the value are decoded.
  2. The event key is assumed to be serialized by the producer as a string type.
  3. The event value is deserialized using the Glue Schema registry Serde (Java) or the confluent-kafka AvroDeserializer (Python).
  4. The function then returns the successfully converted JSON events to the EventBridge pipe, which then invokes the target for each of them.
  5. Events for which Avro deserialization failed are sent to the SQS dead letter queue.

Conclusion

This blog post shows how to implement event consumption, Avro schema validation, and conversion to JSON using Amazon EventBridge Pipes, Glue Schema Registry, and Confluent Schema Registry.

The source code for the presented example is available in the AWS Samples GitHub repository for Glue Schema Registry and Confluent Schema Registry. For more patterns, visit the Serverless Patterns Collection.

For more serverless learning resources, visit Serverless Land.

AWS Glue Data Catalog now supports automatic compaction of Apache Iceberg tables

Post Syndicated from Sébastien Stormacq original https://aws.amazon.com/blogs/aws/aws-glue-data-catalog-now-supports-automatic-compaction-of-apache-iceberg-tables/

Today, we’re making available a new capability of AWS Glue Data Catalog to allow automatic compaction of transactional tables in the Apache Iceberg format. This allows you to keep your transactional data lake tables always performant.

Data lakes were initially designed primarily for storing vast amounts of raw, unstructured, or semi structured data at a low cost, and they were commonly associated with big data and analytics use cases. Over time, the number of possible use cases for data lakes has evolved as organizations have recognized the potential to use data lakes for more than just reporting, requiring the inclusion of transactional capabilities to ensure data consistency.

Data lakes also play a pivotal role in data quality, governance, and compliance, particularly as data lakes store increasing volumes of critical business data, which often requires updates or deletion. Data-driven organizations also need to keep their back end analytics systems in near real-time sync with customer applications. This scenario requires transactional capabilities on your data lake to support concurrent writes and reads without data integrity compromise. Finally, data lakes now serve as integration points, necessitating transactions for safe and reliable data movement between various sources.

To support transactional semantics on data lake tables, organizations adopted an open table format (OTF), such as Apache Iceberg. Adopting OTF formats comes with its own set of challenges: transforming existing data lake tables from Parquet or Avro formats to an OTF format, managing a large number of small files as each transaction generates a new file on Amazon Simple Storage Service (Amazon S3), or managing object and meta-data versioning at scale, just to name a few. Organizations are typically building and managing their own data pipelines to address these challenges, leading to additional undifferentiated work on infrastructure. You need to write code, deploy Spark clusters to run your code, scale the cluster, manage errors, and so on.

When talking with our customers, we learned that the most challenging aspect is the compaction of individual small files produced by each transactional write on tables into a few large files. Large files are faster to read and scan, making your analytics jobs and queries faster to execute. Compaction optimizes the table storage with larger-sized files. It changes the storage for the table from a large number of small files to a small number of larger files. It reduces metadata overhead, lowers network round trips to S3, and improves performance. When you use engines that charge for the compute, the performance improvement is also beneficial to the cost of usage as the queries require less compute capacity to run.

But building custom pipelines to compact and optimize Iceberg tables is time-consuming and expensive. You have to manage the planning, provision infrastructure, and schedule and monitor the compaction jobs. This is why we launch automatic compaction today.

Let’s see how it works
To show you how to enable and monitor automatic compaction on Iceberg tables, I start from the AWS Lake Formation page or the AWS Glue page of the AWS Management Console. I have an existing database with tables in the Iceberg format. I execute transactions on this table over the course of a couple of days, and the table starts to fragment into small files on the underlying S3 bucket.

List of Iceberg table on Lake Formation console

I select the table on which I want to enable compaction, and then I select Enable compaction.

View details of a table in lake formation

An IAM role is required to pass permissions to the Lake Formation service to access my AWS Glue tables, S3 buckets, and CloudWatch log streams. Either I choose to create a new IAM role, or I select an existing one. Your existing role must have lakeformation:GetDataAccess and glue:UpdateTable permissions on the table. The role also needs logs:CreateLogGroup, logs:CreateLogStream, logs:PutLogEvents, to “arn:aws:logs:*:your_account_id:log-group:/aws-lakeformation-acceleration/compaction/logs:*“. The role trusted permission service name must be set to glue.amazonaws.com.

Then, I select Turn on compaction. Et voilà! Compaction is automatic; there is nothing to manage on your side.

The service starts to measure the table’s rate of change. As Iceberg tables can have multiple partitions, the service calculates this change rate for each partition and schedules managed jobs to compact the partitions where this rate of change breaches a threshold value.

When the table accumulates a high number of changes, you will be able to view the Compaction history under the Optimization tab in the console.

Lake formation compaction history in the console

You can also monitor the whole process either by observing the number of files on your S3 bucket (use the NumberOfObjects metric) or one of the two new Lake Formation metrics: numberOfBytesCompacted or numberOfFilesCompacted.

Iceberg table compaction metrics in the cloudwatch console

In addition to the AWS console, there are six new APIs that expose this new capability:CreateTableOptimizer, BatchGetTableOptimizer , UpdateTableOptimizer, DeleteTableOptimizer, GetTableOptimizer, and ListTableOptimizerRuns. These APIs are available in the AWS SDKs and AWS Command Line Interface (AWS CLI). As usual, don’t forget to update the SDK or the CLI to their latest versions to get access to these new APIs.

Things to know
As we launched this new capability today, there are a couple of additional points I’d like to share with you:

Availability
This new capability is available starting today in all AWS Regions where AWS Glue Data Catalog is available.

The pricing metric is the data processing unit (DPU), a relative measure of processing power that consists of 4 vCPUs of compute capacity and 16 GB of memory. There is a charge per DPU/hours metered by second, with a minimum of one minute.

Now it’s time to decommission your existing compaction data pipeline and switch to this new, entirely managed capability today.

— seb

Deploy Amazon QuickSight dashboards to monitor AWS Glue ETL job metrics and set alarms

Post Syndicated from Michael Hamilton original https://aws.amazon.com/blogs/big-data/deploy-amazon-quicksight-dashboards-to-monitor-aws-glue-etl-job-metrics-and-set-alarms/

No matter the industry or level of maturity within AWS, our customers require better visibility into their AWS Glue usage. Better visibility can lend itself to gains in operational efficiency, informed business decisions, and further transparency into your return on investment (ROI) when using the various features available through AWS Glue.

As your company grows, you should be able to answer simple questions about your AWS Glue usage, such as the following:

  • Where am I spending the most with AWS Glue?
  • Where can I save the most by taking advantage of new AWS Glue features?
  • What does my overall usage look like using AWS Glue?

AWS offers services such as Amazon QuickSight, a serverless business intelligence (BI) service that lets you centralize this view and even ask natural language questions of your data, using Amazon QuickSight Q. QuickSight can give business leaders and their technology counterparts a common landscape for reporting important details of their usage, providing automated narratives to bridge communication gaps.

In this post, we explore how to combine AWS Glue usage information and metrics with centralized reporting and visualization using QuickSight. This can provide you with a more comprehensive view of your usage and tools to help you dive deep into your AWS Glue job run environment. You have metrics available per job run within the AWS Glue console, but they don’t cover all available AWS Glue job metrics, and the visuals aren’t as interactive compared to the QuickSight dashboard.

Although we don’t cover optimizing your jobs for costs in this post, you can refer to Monitor and optimize cost on AWS Glue for Apache Spark to learn how to fine-tune your AWS Glue jobs for performance, efficiency ,and cost-optimization.

Let’s dive in!

Solution overview

The following diagram illustrates the architecture for the given solution. At a high level, a scheduled event triggers an orchestration flow consisting of multiple data, compute, and analytics resources—the output of which culminates as a set of visuals in a BI dashboard.

solution architecture

Now let’s dig into the technical details involved in this solution.

An AWS Step Functions workflow is scheduled to run once per hour through Amazon EventBridge, which triggers an AWS Lambda function that calls the AWS Glue GetJob and GetJobRun APIs. We parse this data to check for jobs that have succeeded, stopped, or failed in the past hour, as well as any streaming jobs. The metadata is extracted from each job run, including information like runtime, start time, end time, auto scaling, number of workers, and worker type, and is written to an Amazon DynamoDB table with TTL (time to live) enabled to ensure the table doesn’t grow too large.

We move into a parallel state to check two tables that Amazon Athena writes the output of the federated queries to. Athena first checks to make sure the tables exist in Amazon Simple Storage Service (Amazon S3), where the data will be stored. If the tables don’t exist, Athena creates them. One federated query gathers AWS Glue metric data from Amazon CloudWatch metrics; the other gathers data from the DynamoDB table where Lambda writes the AWS Glue job metadata it’s collecting. Both federated queries utilize appropriate filtering in order to only scan the necessary data from each source.

There is a choice state for each branch. If there is no new data to be added to a table in Amazon S3, the state ends and waits for the other to complete. For example, there could be an AWS Glue job that is running while the step is evaluating. In this case, the metrics for the job would be inserted in the table on Amazon S3, but the metadata from DynamoDB wouldn’t arrive until the following hour after the job has succeeded, stopped, or failed.

When new metrics or metadata are found, Athena inserts this data to the metrics or metadata tables in Amazon S3, which are both partitioned by the hour. After the data is inserted, the final steps call the QuickSight CreateIngestion API, which triggers data ingestion into QuickSight SPICE to power interactive analysis. At this point, the workflow has finished running and will run again the following hour.

In the following sections, we show you how to set up the solution, explore the dashboards, and configure alarms.

The code for this solution can be found at the AWS samples GitHub repository.

Prerequisites

You should have the following prerequisites:

Deploy solution resources with the AWS CDK

To provision the resources that build the dashboard and keep it up to date, we provide steps to download and deploy the solution via the AWS CDK. The solution was developed with cost-optimization as a priority, but some resources in the stack will incur costs once deployed.

This solution generates the following resources:

  • IAM role
  • EventBridge rule
  • Step Functions state machine
  • Lambda function
  • S3 bucket
  • Two AWS Glue tables and one AWS Glue database
  • DynamoDB table
  • Athena queries invoked by Step Functions
  • QuickSight data source, dataset, analysis, and dashboard

To deploy the solution, complete the following steps:

  1. Clone the source code from AWS samples GitHub repository to the client:
    git clone https://github.com/aws-samples/glue-metrics-in-quicksight

  2. Bootstrap your AWS CDK app:
    cd glue-metrics-in-quicksight
    npm i aws-cdk-lib
    cdk bootstrap

  3. Deploy the solution with the required parameters:
    1. The first parameter is for a new S3 bucket to be created, which holds the AWS Glue metrics and metadata.
    2. The second parameter is required in order for QuickSight to assign permissions to the user who will manage the assets. Refer to Managing user access inside Amazon QuickSight to find your existing QuickSight users.
      cdk deploy --parameters BucketName=New-Unique-Bucket-Name --parameters QuicksightUsername=QuickSight-Existing-User

If your deployment fails, make sure you installed the AWS CDK library and rerun cdk deploy after installing:

npm i aws-cdk-lib

The deployment may take up to 10 minutes.

After the solution is deployed, the Step Functions state machine will evaluate once per hour if it should ingest data into QuickSight. You can run some AWS Glue jobs after the stack is deployed and check the QuickSight dashboard in the next hour or two, where the job metadata and metrics will be populated for your analysis.

Explore the dashboard

The dashboard contains two sheets: Glue Jobs and Glue Metrics.

The Glue Jobs sheet includes all of the metadata about your AWS Glue job runs, including AWS Glue for Apache Spark, AWS Glue for Ray, and AWS Glue streaming ETL. Most of the visuals also have a hierarchy that you can drill down into with QuickSight, going as low as each specific job run ID. You can use controls to filter by date, job name, and job run ID.

In the following demonstration, you will see the pivot table, which is a simple view of all our job metadata, including estimated cost per job and job run. We open up a job name and see the different job runs. There is one individual job run that we would like to inspect the metrics on, so we choose the job name and choose View metrics for job run id: <my job run id>. This will take us to the Glue Metrics sheet and automatically filter for the job run ID we want to view.

glue information sheet

The Glue Metrics sheet is built to reflect the documentation we provide in AWS Glue resource monitoring. This documentation helps explain each visual in the dashboard. You can use the Glue Metrics sheet to view aggregated metrics across all jobs, a single job, or down to the job run ID.

To populate the Glue Metrics sheet, your AWS Glue jobs must be enabled to capture metrics in CloudWatch.

glue metrics sheet

Set up alerts

Setting up alerts on measures is also straightforward to do in QuickSight. To do so, choose (right-click) one of the tracked measures on either worksheet and choose Create Alarm. This will bring you to the configuration page to set up the metric you’d like to be alerted on.

quicksight alarm

The dashboard is designed to give you the freedom to alter it and make your own visualizations with the metadata and metrics that are provided to you. If you want even more insight into cost, consider deploying the CUDOS dashboard as well!

Clean up

If you no longer need the dashboard, delete the CDK app:

cdk destroy

Conclusion

In this post, we talked about the importance of having observability of your AWS Glue jobs and provided an AWS CDK app that deploys a QuickSight dashboard for you. We hope this helps you optimize your AWS Glue environment using the insights the dashboard provides. To learn about event-based alerting for your AWS Glue for Apache Spark and Ray jobs, refer to Automate alerting and reporting for AWS Glue job resource usage.


About the authors

Michael Hamilton is a Sr Analytics Solutions Architect focusing on helping enterprise customers in the south east modernize and simplify their analytics workloads on AWS. He enjoys mountain biking and spending time with his wife and three children when not working.

Cody Penta is a Solutions Architect at Amazon Web Services and is based out of Charlotte, NC. He has a focus in security and CDK, and enjoys solving the really difficult problems in the technology world. Off the clock, he loves relaxing in the mountains, coding personal projects, and gaming.

Angus Ferguson is a Solutions Architect at AWS who is passionate about meeting customers across the world, helping them solve their technical challenges. Angus specializes in Data & Analytics with a focus on customers in the financial services industry.

Unlock scalable analytics with AWS Glue and Google BigQuery

Post Syndicated from Kartikay Khator original https://aws.amazon.com/blogs/big-data/unlock-scalable-analytics-with-aws-glue-and-google-bigquery/

Data integration is the foundation of robust data analytics. It encompasses the discovery, preparation, and composition of data from diverse sources. In the modern data landscape, accessing, integrating, and transforming data from diverse sources is a vital process for data-driven decision-making. AWS Glue, a serverless data integration and extract, transform, and load (ETL) service, has revolutionized this process, making it more accessible and efficient. AWS Glue eliminates complexities and costs, allowing organizations to perform data integration tasks in minutes, boosting efficiency.

This blog post explores the newly announced managed connector for Google BigQuery and demonstrates how to build a modern ETL pipeline with AWS Glue Studio without writing code.

Overview of AWS Glue

AWS Glue is a serverless data integration service that makes it easier to discover, prepare, and combine data for analytics, machine learning (ML), and application development. AWS Glue provides all the capabilities needed for data integration, so you can start analyzing your data and putting it to use in minutes instead of months. AWS Glue provides both visual and code-based interfaces to make data integration easier. Users can more easily find and access data using the AWS Glue Data Catalog. Data engineers and ETL (extract, transform, and load) developers can visually create, run, and monitor ETL workflows in a few steps in AWS Glue Studio. Data analysts and data scientists can use AWS Glue DataBrew to visually enrich, clean, and normalize data without writing code.

Introducing Google BigQuery Spark connector

To meet the demands of diverse data integration use cases, AWS Glue now offers a native spark connector for Google BigQuery. Customers can now use AWS Glue 4.0 for Spark to read from and write to tables in Google BigQuery. Additionally, you can read an entire table or run a custom query and write your data using direct and indirect writing methods. You connect to BigQuery using service account credentials stored securely in AWS Secrets Manager.

Benefits of Google BigQuery Spark connector

  • Seamless integration: The native connector offers an intuitive and streamlined interface for data integration, reducing the learning curve.
  • Cost efficiency: Building and maintaining custom connectors can be expensive. The native connector provided by AWS Glue is a cost-effective alternative.
  • Efficiency: Data transformation tasks that previously took weeks or months can now be accomplished within minutes, optimizing efficiency.

Solution overview

In this example, you create two ETL jobs using AWS Glue with the native Google BigQuery connector.

  1. Query a BigQuery table and save the data into Amazon Simple Storage Service (Amazon S3) in Parquet format.
  2. Use the data extracted from the first job to transform and create an aggregated result to be stored in Google BigQuery.

solution architecture

Prerequisites

The dataset used in this solution is the NCEI/WDS Global Significant Earthquake Database, with a global listing of over 5,700 earthquakes from 2150 BC to the present. Copy this public data into your Google BigQuery project or use your existing dataset.

Configure BigQuery connections

To connect to Google BigQuery from AWS Glue, see Configuring BigQuery connections. You must create and store your Google Cloud Platform credentials in a Secrets Manager secret, then associate that secret with a Google BigQuery AWS Glue connection.

Set up Amazon S3

Every object in Amazon S3 is stored in a bucket. Before you can store data in Amazon S3, you must create an S3 bucket to store the results.

To create an S3 bucket:

  1. On the AWS Management Console for Amazon S3, choose Create bucket.
  2. Enter a globally unique Name for your bucket; for example, awsglue-demo.
  3. Choose Create bucket.

Create an IAM role for the AWS Glue ETL job

When you create the AWS Glue ETL job, you specify an AWS Identity and Access Management (IAM) role for the job to use. The role must grant access to all resources used by the job, including Amazon S3 (for any sources, targets, scripts, driver files, and temporary directories), and Secrets Manager.

For instructions, see Configure an IAM role for your ETL job.

Solution walkthrough

Create a visual ETL job in AWS Glue Studio to transfer data from Google BigQuery to Amazon S3

  1. Open the AWS Glue console.
  2. In AWS Glue, navigate to Visual ETL under the ETL jobs section and create a new ETL job using Visual with a blank canvas.
  3. Enter a Name for your AWS Glue job, for example, bq-s3-dataflow.
  4. Select Google BigQuery as the data source.
    1. Enter a name for your Google BigQuery source node, for example, noaa_significant_earthquakes.
    2. Select a Google BigQuery connection, for example, bq-connection.
    3. Enter a Parent project, for example, bigquery-public-datasources.
    4. Select Choose a single table for the BigQuery Source.
    5. Enter the table you want to migrate in the form [dataset].[table], for example, noaa_significant_earthquakes.earthquakes.
      big query data source for bq to amazon s3 dataflow
  5. Next, choose the data target as Amazon S3.
    1. Enter a Name for the target Amazon S3 node, for example, earthquakes.
    2. Select the output data Format as Parquet.
    3. Select the Compression Type as Snappy.
    4. For the S3 Target Location, enter the bucket created in the prerequisites, for example, s3://<YourBucketName>/noaa_significant_earthquakes/earthquakes/.
    5. You should replace <YourBucketName> with the name of your bucket.
      s3 target node for bq to amazon s3 dataflow
  6. Next go to the Job details. In the IAM Role, select the IAM role from the prerequisites, for example, AWSGlueRole.
    IAM role for bq to amazon s3 dataflow
  7. Choose Save.

Run and monitor the job

  1. After your ETL job is configured, you can run the job. AWS Glue will run the ETL process, extracting data from Google BigQuery and loading it into your specified S3 location.
  2. Monitor the job’s progress in the AWS Glue console. You can see logs and job run history to ensure everything is running smoothly.

run and monitor bq to amazon s3 dataflow

Data validation

  1. After the job has run successfully, validate the data in your S3 bucket to ensure it matches your expectations. You can see the results using Amazon S3 Select.

review results in amazon s3 from the bq to s3 dataflow run

Automate and schedule

  1. If needed, set up job scheduling to run the ETL process regularly. You can use AWS to automate your ETL jobs, ensuring your S3 bucket is always up to date with the latest data from Google BigQuery.

You’ve successfully configured an AWS Glue ETL job to transfer data from Google BigQuery to Amazon S3. Next, you create the ETL job to aggregate this data and transfer it to Google BigQuery.

Finding earthquake hotspots with AWS Glue Studio Visual ETL.

  1. Open AWS Glue console.
  2. In AWS Glue navigate to Visual ETL under the ETL jobs section and create a new ETL job using Visual with a blank canvas.
  3. Provide a name for your AWS Glue job, for example, s3-bq-dataflow.
  4. Choose Amazon S3 as the data source.
    1. Enter a Name for the source Amazon S3 node, for example, earthquakes.
    2. Select S3 location as the S3 source type.
    3. Enter the S3 bucket created in the prerequisites as the S3 URL, for example, s3://<YourBucketName>/noaa_significant_earthquakes/earthquakes/.
    4. You should replace <YourBucketName> with the name of your bucket.
    5. Select the Data format as Parquet.
    6. Select Infer schema.
      amazon s3 source node for s3 to bq dataflow
  5. Next, choose Select Fields transformation.
    1. Select earthquakes as Node parents.
    2. Select fields: id, eq_primary, and country.
      select field node for amazon s3 to bq dataflow
  6. Next, choose Aggregate transformation.
    1. Enter a Name, for example Aggregate.
    2. Choose Select Fields as Node parents.
    3. Choose eq_primary and country as the group by columns.
    4. Add id as the aggregate column and count as the aggregation function.
      aggregate node for amazon s3 to bq dataflow
  7. Next, choose RenameField transformation.
    1. Enter a name for the source Amazon S3 node, for example, Rename eq_primary.
    2. Choose Aggregate as Node parents.
    3. Choose eq_primary as the Current field name and enter earthquake_magnitude as the New field name.
      rename eq_primary field for amazon s3 to bq dataflow
  8. Next, choose RenameField transformation
    1. Enter a name for the source Amazon S3 node, for example, Rename count(id).
    2. Choose Rename eq_primary as Node parents.
    3. Choose count(id) as the Current field name and enter number_of_earthquakes as the New field name.
      rename cound(id) field for amazon s3 to bq dataflow
  9. Next, choose the data target as Google BigQuery.
    1. Provide a name for your Google BigQuery source node, for example, most_powerful_earthquakes.
    2. Select a Google BigQuery connection, for example, bq-connection.
    3. Select Parent project, for example, bigquery-public-datasources.
    4. Enter the name of the Table you want to create in the form [dataset].[table], for example, noaa_significant_earthquakes.most_powerful_earthquakes.
    5. Choose Direct as the Write method.
      bq destination for amazon s3 to bq dataflow
  10. Next go to the Job details tab and in the IAM Role, select the IAM role from the prerequisites, for example, AWSGlueRole.
    IAM role for amazon s3 to bq dataflow
  11. Choose Save.

Run and monitor the job

  1. After your ETL job is configured, you can run the job. AWS Glue runs the ETL process, extracting data from Google BigQuery and loading it into your specified S3 location.
  2. Monitor the job’s progress in the AWS Glue console. You can see logs and job run history to ensure everything is running smoothly.

monitor and run for amazon s3 to bq dataflow

Data validation

  1. After the job has run successfully, validate the data in your Google BigQuery dataset. This ETL job returns a list of countries where the most powerful earthquakes have occurred. It provides these by counting the number of earthquakes for a given magnitude by country.

aggregated results for amazon s3 to bq dataflow

Automate and schedule

  1. You can set up job scheduling to run the ETL process regularly. AWS Glue allows you to automate your ETL jobs, ensuring your S3 bucket is always up to date with the latest data from Google BigQuery.

That’s it! You’ve successfully set up an AWS Glue ETL job to transfer data from Amazon S3 to Google BigQuery. You can use this integration to automate the process of data extraction, transformation, and loading between these two platforms, making your data readily available for analysis and other applications.

Clean up

To avoid incurring charges, clean up the resources used in this blog post from your AWS account by completing the following steps:

  1. On the AWS Glue console, choose Visual ETL in the navigation pane.
  2. From the list of jobs, select the job bq-s3-data-flow and delete it.
  3. From the list of jobs, select the job s3-bq-data-flow and delete it.
  4. On the AWS Glue console, choose Connections in the navigation pane under Data Catalog.
  5. Choose the BiqQuery connection you created and delete it.
  6. On the Secrets Manager console, choose the secret you created and delete it.
  7. On the IAM console, choose Roles in the navigation pane, then select the role you created for the AWS Glue ETL job and delete it.
  8. On the Amazon S3 console, search for the S3 bucket you created, choose Empty to delete the objects, then delete the bucket.
  9. Clean up resources in your Google account by deleting the project that contains the Google BigQuery resources. Follow the documentation to clean up the Google resources.

Conclusion

The integration of AWS Glue with Google BigQuery simplifies the analytics pipeline, reduces time-to-insight, and facilitates data-driven decision-making. It empowers organizations to streamline data integration and analytics. The serverless nature of AWS Glue means no infrastructure management, and you pay only for the resources consumed while your jobs are running. As organizations increasingly rely on data for decision-making, this native spark connector provides an efficient, cost-effective, and agile solution to swiftly meet data analytics needs.

If you’re interested to see how to read from and write to tables in Google BigQuery in AWS Glue, take a look at step-by-step video tutorial. In this tutorial, we walk through the entire process, from setting up the connection to running the data transfer flow. For more information on AWS Glue, visit AWS Glue.

Appendix

If you are looking to implement this example, using code instead of the AWS Glue console, use the following code snippets.

Reading data from Google BigQuery and writing data into Amazon S3

import sys
from awsglue.transforms import *
from awsglue.utils import getResolvedOptions
from pyspark.context import SparkContext
from awsglue.context import GlueContext
from awsglue.job import Job

args = getResolvedOptions(sys.argv, ["JOB_NAME"])
sc = SparkContext()
glueContext = GlueContext(sc)
spark = glueContext.spark_session
job = Job(glueContext)
job.init(args["JOB_NAME"], args)

# STEP-1 Read the data from Big Query Table 
noaa_significant_earthquakes_node1697123333266 = (
    glueContext.create_dynamic_frame.from_options(
        connection_type="bigquery",
        connection_options={
            "connectionName": "bq-connection",
            "parentProject": "bigquery-public-datasources",
            "sourceType": "table",
            "table": "noaa_significant_earthquakes.earthquakes",
        },
        transformation_ctx="noaa_significant_earthquakes_node1697123333266",
    )
)
# STEP-2 Write the data read from Big Query Table into S3
# You should replace <YourBucketName> with the name of your bucket.
earthquakes_node1697157772747 = glueContext.write_dynamic_frame.from_options(
    frame=noaa_significant_earthquakes_node1697123333266,
    connection_type="s3",
    format="glueparquet",
    connection_options={
        "path": "s3://<YourBucketName>/noaa_significant_earthquakes/earthquakes/",
        "partitionKeys": [],
    },
    format_options={"compression": "snappy"},
    transformation_ctx="earthquakes_node1697157772747",
)

job.commit()

Reading and aggregating data from Amazon S3 and writing into Google BigQuery

import sys
from awsglue.transforms import *
from awsglue.utils import getResolvedOptions
from pyspark.context import SparkContext
from awsglue.context import GlueContext
from awsglue.job import Job
from awsglue.dynamicframe import DynamicFrame
from awsglue import DynamicFrame
from pyspark.sql import functions as SqlFuncs

def sparkAggregate(
    glueContext, parentFrame, groups, aggs, transformation_ctx
) -> DynamicFrame:
    aggsFuncs = []
    for column, func in aggs:
        aggsFuncs.append(getattr(SqlFuncs, func)(column))
    result = (
        parentFrame.toDF().groupBy(*groups).agg(*aggsFuncs)
        if len(groups) > 0
        else parentFrame.toDF().agg(*aggsFuncs)
    )
    return DynamicFrame.fromDF(result, glueContext, transformation_ctx)

args = getResolvedOptions(sys.argv, ["JOB_NAME"])
sc = SparkContext()
glueContext = GlueContext(sc)
spark = glueContext.spark_session
job = Job(glueContext)
job.init(args["JOB_NAME"], args)

# STEP-1 Read the data from Amazon S3 bucket
# You should replace <YourBucketName> with the name of your bucket.
earthquakes_node1697218776818 = glueContext.create_dynamic_frame.from_options(
    format_options={},
    connection_type="s3",
    format="parquet",
    connection_options={
        "paths": [
            "s3://<YourBucketName>/noaa_significant_earthquakes/earthquakes/"
        ],
        "recurse": True,
    },
    transformation_ctx="earthquakes_node1697218776818",
)

# STEP-2 Select fields
SelectFields_node1697218800361 = SelectFields.apply(
    frame=earthquakes_node1697218776818,
    paths=["id", "eq_primary", "country"],
    transformation_ctx="SelectFields_node1697218800361",
)

# STEP-3 Aggregate data
Aggregate_node1697218823404 = sparkAggregate(
    glueContext,
    parentFrame=SelectFields_node1697218800361,
    groups=["eq_primary", "country"],
    aggs=[["id", "count"]],
    transformation_ctx="Aggregate_node1697218823404",
)

Renameeq_primary_node1697219483114 = RenameField.apply(
    frame=Aggregate_node1697218823404,
    old_name="eq_primary",
    new_name="earthquake_magnitude",
    transformation_ctx="Renameeq_primary_node1697219483114",
)

Renamecountid_node1697220511786 = RenameField.apply(
    frame=Renameeq_primary_node1697219483114,
    old_name="`count(id)`",
    new_name="number_of_earthquakes",
    transformation_ctx="Renamecountid_node1697220511786",
)

# STEP-1 Write the aggregated data in Google BigQuery
most_powerful_earthquakes_node1697220563923 = (
    glueContext.write_dynamic_frame.from_options(
        frame=Renamecountid_node1697220511786,
        connection_type="bigquery",
        connection_options={
            "connectionName": "bq-connection",
            "parentProject": "bigquery-public-datasources",
            "writeMethod": "direct",
            "table": "noaa_significant_earthquakes.most_powerful_earthquakes",
        },
        transformation_ctx="most_powerful_earthquakes_node1697220563923",
    )
)

job.commit()


About the authors

Kartikay Khator is a Solutions Architect in Global Life Sciences at Amazon Web Services (AWS). He is passionate about building innovative and scalable solutions to meet the needs of customers, focusing on AWS Analytics services. Beyond the tech world, he is an avid runner and enjoys hiking.

Kamen SharlandjievKamen Sharlandjiev is a Sr. Big Data and ETL Solutions Architect and Amazon AppFlow expert. He’s on a mission to make life easier for customers who are facing complex data integration challenges. His secret weapon? Fully managed, low-code AWS services that can get the job done with minimal effort and no coding.

Anshul SharmaAnshul Sharma is a Software Development Engineer in AWS Glue Team. He is driving the connectivity charter which provide Glue customer native way of connecting any Data source (Data-warehouse, Data-lakes, NoSQL etc) to Glue ETL Jobs. Beyond the tech world, he is a cricket and soccer lover.